Conservation of cofitness between GFF4989 and GFF2322 in Variovorax sp. SCN45

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Variovorax sp. SCN45 1.0 GFF4989 Transcriptional regulator, LysR family 1.0 GFF2322 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) 0.52 17
Variovorax sp. OAS795 0.81 ABID97_RS04250 LysR family transcriptional regulator 0.83 ABID97_RS23850 5-oxoprolinase subunit PxpB low > 91
Pseudomonas putida KT2440 0.40 PP_2997 CnmA 0.30 PP_4576 allophanate hydrolase subunit low > 96
Ralstonia sp. UNC404CL21Col 0.40 ABZR87_RS18430 LysR family transcriptional regulator 0.64 ABZR87_RS15335 5-oxoprolinase subunit PxpB low > 80
Paraburkholderia bryophila 376MFSha3.1 0.39 H281DRAFT_01676 transcriptional regulator, LysR family 0.63 H281DRAFT_05813 sensor histidine kinase inhibitor, KipI family low > 103
Burkholderia phytofirmans PsJN 0.39 BPHYT_RS27350 LysR family transcriptional regulator 0.64 BPHYT_RS18625 allophanate hydrolase low > 109
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS19485 LysR family transcriptional regulator 0.58 QEN71_RS28650 5-oxoprolinase subunit PxpB low > 153
Klebsiella michiganensis M5al 0.34 BWI76_RS01055 LysR family transcriptional regulator 0.50 BWI76_RS08350 carboxylase low > 92
Shewanella amazonensis SB2B 0.30 Sama_2520 putative transcriptional regulator (RefSeq) 0.42 Sama_0023 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.28 Shew_2857 LysR family transcriptional regulator (RefSeq) 0.45 Shew_0008 allophanate hydrolase subunit 1 (RefSeq) low > 60
Serratia liquefaciens MT49 0.27 IAI46_16085 LysR family transcriptional regulator 0.56 IAI46_06215 5-oxoprolinase subunit PxpB low > 86
Enterobacter sp. TBS_079 0.24 MPMX20_02266 PCP degradation transcriptional activation protein 0.51 MPMX20_01345 5-oxoprolinase subunit B low > 85
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_12575 transcriptional regulator LeuO 0.22 CSW01_18060 allophanate hydrolase low > 62
Escherichia fergusonii Becca 0.22 EFB2_03970 HTH-type transcriptional regulator LeuO 0.51 EFB2_03392 5-oxoprolinase subunit B low > 86
Escherichia coli ECRC100 0.22 OKFHMN_10705 leuO transcriptional regulator LeuO 0.51 OKFHMN_07005 pxpB 5-oxoprolinase subunit PxpB low > 80
Escherichia coli ECRC102 0.22 NIAGMN_08555 leuO transcriptional regulator LeuO 0.51 NIAGMN_05060 pxpB 5-oxoprolinase subunit PxpB — —
Escherichia coli ECRC99 0.22 KEDOAH_17450 leuO transcriptional regulator LeuO 0.51 KEDOAH_20960 pxpB 5-oxoprolinase subunit PxpB — —
Escherichia coli Nissle 1917 0.22 ECOLIN_RS00410 transcriptional regulator LeuO 0.51 ECOLIN_RS03805 5-oxoprolinase subunit PxpB low > 55
Escherichia coli ECRC101 0.22 MCAODC_01220 leuO transcriptional regulator LeuO 0.51 MCAODC_26225 pxpB 5-oxoprolinase subunit PxpB low > 87
Escherichia coli ECRC98 0.22 JDDGAC_14300 leuO transcriptional regulator LeuO 0.51 JDDGAC_10660 pxpB 5-oxoprolinase subunit PxpB low > 86
Escherichia coli BW25113 0.22 b0076 leuO probable transcriptional activator for leuABCD operon (VIMSS) 0.51 b0711 ybgJ predicted enzyme subunit (NCBI) low > 76
Escherichia coli BL21 0.22 ECD_00078 global transcription factor 0.51 ECD_00671 putative allophanate hydrolase, subunit 1 low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.22 OHPLBJKB_03582 HTH-type transcriptional regulator LeuO 0.51 OHPLBJKB_03006 putative protein YbgJ low > 73
Escherichia coli ECOR38 0.22 HEPCGN_08685 leuO transcriptional regulator LeuO 0.51 HEPCGN_01205 pxpB 5-oxoprolinase subunit PxpB low > 87
Escherichia coli ECRC62 0.22 BNILDI_08560 leuO transcriptional regulator LeuO 0.51 BNILDI_21385 pxpB 5-oxoprolinase subunit PxpB low > 75
Escherichia coli ECOR27 0.22 NOLOHH_03050 leuO transcriptional regulator LeuO 0.51 NOLOHH_23390 pxpB 5-oxoprolinase subunit PxpB low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF162 Probable transcriptional activator for leuABCD operon 0.50 GFF4616 Allophanate hydrolase 2 subunit 1 (EC 3.5.1.54) low > 78

Not shown: 9 genomes with orthologs for GFF4989 only; 31 genomes with orthologs for GFF2322 only