Conservation of cofitness between GFF3658 and GFF2254 in Sphingobium sp. HT1-2

22 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF3658 Tetrapartite efflux system, inner membrane component FusBC-like 1.0 GFF2254 DksA family protein PA5536 (no Zn-finger) 0.69 16
Rhodopseudomonas palustris CGA009 0.28 TX73_014030 FUSC family protein 0.61 TX73_020255 RNA polymerase-binding protein DksA low > 86
Enterobacter sp. TBS_079 0.26 MPMX20_01146 p-hydroxybenzoic acid efflux pump subunit AaeB 0.35 MPMX20_00831 RNA polymerase-binding transcription factor DksA low > 85
Klebsiella michiganensis M5al 0.25 BWI76_RS12935 fusaric acid resistance protein 0.34 BWI76_RS05015 transcriptional regulator low > 92
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS33905 transporter 0.37 RR42_RS01030 molecular chaperone DnaK — —
Enterobacter asburiae PDN3 0.24 EX28DRAFT_2414 Predicted membrane protein 0.35 EX28DRAFT_3734 transcriptional regulator, TraR/DksA family — —
Pseudomonas sp. DMC3 0.23 GFF4269 p-hydroxybenzoic acid efflux pump subunit AaeB 0.34 GFF4034 RNA polymerase-binding transcription factor DksA low > 89
Pseudomonas sp. SVBP6 0.22 COO64_RS12400 FUSC family protein 0.35 COO64_RS15070 dksA RNA polymerase-binding protein DksA low > 93
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_11345 fusaric acid resistance protein 0.35 AO353_14420 molecular chaperone DnaK low > 101
Pseudomonas orientalis W4I3 0.22 QF045_RS03685 FUSC family protein 0.33 QF045_RS26135 RNA polymerase-binding protein DksA low > 93
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_507 Inner membrane component of tripartite multidrug resistance system 0.34 PfGW456L13_1528 C4-type zinc finger protein, DksA/TraR family low > 87
Pseudomonas lactucae CFBP13502 0.22 GEMAOFIL_00363 p-hydroxybenzoic acid efflux pump subunit AaeB 0.33 GEMAOFIL_04926 RNA polymerase-binding transcription factor DksA low > 96
Pseudomonas simiae WCS417 0.21 PS417_00710 fusaric acid resistance protein 0.33 PS417_23875 molecular chaperone DnaK — —
Pseudomonas fluorescens SBW25 0.21 PFLU_RS00705 FUSC family protein 0.33 PFLU_RS25715 RNA polymerase-binding protein DksA low > 109
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS00705 FUSC family protein 0.33 PFLU_RS25715 RNA polymerase-binding protein DksA low > 109
Agrobacterium fabrum C58 0.20 Atu5541 hypothetical protein 0.60 Atu1359 dnaK deletion suppressor protein low > 89
Pseudomonas fluorescens FW300-N2C3 0.13 AO356_05130 fusaric acid resistance protein 0.35 AO356_16095 molecular chaperone DnaK low > 104
Pseudomonas fluorescens FW300-N1B4 0.13 Pf1N1B4_581 membrane protein, putative 0.34 Pf1N1B4_2862 C4-type zinc finger protein, DksA/TraR family — —
Pseudomonas sp. RS175 0.13 PFR28_00579 p-hydroxybenzoic acid efflux pump subunit AaeB 0.34 PFR28_03714 RNA polymerase-binding transcription factor DksA low > 88
Pseudomonas fluorescens FW300-N2E2 0.12 Pf6N2E2_2879 membrane protein, putative 0.31 Pf6N2E2_5160 C4-type zinc finger protein, DksA/TraR family low > 103
Pseudomonas sp. S08-1 0.12 OH686_05790 Tetrapartite efflux system, inner membrane component FusBC-like 0.34 OH686_17280 RNA polymerase-binding protein DksA — —
Pseudomonas aeruginosa MRSN321 0.12 DY961_RS06060 FUSC family protein 0.34 DY961_RS09350 dksA;go_function=enzyme RNA polymerase-binding protein DksA low > 100
Pseudomonas aeruginosa PUPa3 0.12 DQ20_RS46720 FUSC family protein 0.34 DQ20_RS52680 dksA;go_function=enzyme RNA polymerase-binding protein DksA low > 101

Not shown: 3 genomes with orthologs for GFF3658 only; 70 genomes with orthologs for GFF2254 only