Conservation of cofitness between PS417_10240 and PS417_08545 in Pseudomonas simiae WCS417

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_10240 hypothetical protein 1.0 PS417_08545 aromatic ring-opening dioxygenase LigB 0.16 15
Pseudomonas fluorescens SBW25 0.92 PFLU_RS14130 hypothetical protein 0.94 PFLU_RS08495 dioxygenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS14130 hypothetical protein 0.94 PFLU_RS08495 dioxygenase low > 109
Pseudomonas fluorescens FW300-N2E3 0.78 AO353_22565 hypothetical protein 0.85 AO353_19135 aromatic ring-opening dioxygenase LigB low > 101
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_5787 Gifsy-2 prophage protein 0.83 Pf1N1B4_264 FIG074102: hypothetical protein low > 87
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_3827 Gifsy-2 prophage protein 0.86 PfGW456L13_2248 FIG074102: hypothetical protein low > 87
Pseudomonas putida KT2440 0.73 PP_2941 conserved protein of unknown function 0.78 PP_1869 4,5-DOPA-dioxygenase low > 96
Pseudomonas syringae pv. syringae B728a 0.46 Psyr_2763 Protein of unknown function DUF159 0.79 Psyr_3618 Catalytic LigB subunit of aromatic ring-opening dioxygenase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.46 Psyr_2763 Protein of unknown function DUF159 0.79 Psyr_3618 Catalytic LigB subunit of aromatic ring-opening dioxygenase low > 86
Escherichia fergusonii Becca 0.40 EFB2_02014 SOS response-associated protein YedK 0.33 EFB2_00767 4,5-DOPA dioxygenase extradiol low > 86
Escherichia coli ECRC102 0.40 NIAGMN_02315 yedK Abasic site processing protein YedK 0.34 NIAGMN_16555 ygiD 4,5-DOPA dioxygenase extradiol
Escherichia coli ECRC99 0.40 KEDOAH_02355 yedK Abasic site processing protein YedK 0.34 KEDOAH_09355 ygiD 4,5-DOPA dioxygenase extradiol
Escherichia coli ECRC101 0.40 MCAODC_19655 yedK Abasic site processing protein YedK 0.34 MCAODC_09305 ygiD 4,5-DOPA dioxygenase extradiol
Escherichia coli ECRC101 0.40 OKFHMN_25735 yedK Abasic site processing protein YedK 0.34 OKFHMN_18790 ygiD 4,5-DOPA dioxygenase extradiol
Escherichia coli ECRC98 0.40 JDDGAC_00325 yedK Abasic site processing protein YedK 0.34 JDDGAC_22425 ygiD 4,5-DOPA dioxygenase extradiol
Enterobacter sp. TBS_079 0.39 MPMX20_04740 SOS response-associated protein YedK 0.35 MPMX20_03885 4,5-DOPA dioxygenase extradiol low > 85
Escherichia coli BW25113 0.39 b1931 yedK hypothetical protein (NCBI) 0.35 b3039 ygiD predicted dioxygenase (RefSeq) low > 76
Escherichia coli ECRC62 0.39 BNILDI_15145 yedK Abasic site processing protein YedK 0.35 BNILDI_00920 ygiD 4,5-DOPA dioxygenase extradiol
Escherichia coli ECOR27 0.39 NOLOHH_16355 yedK Abasic site processing protein YedK 0.35 NOLOHH_10595 ygiD 4,5-DOPA dioxygenase extradiol
Enterobacter asburiae PDN3 0.39 EX28DRAFT_1259 Uncharacterized conserved protein 0.35 EX28DRAFT_3076 Uncharacterized conserved protein low > 76
Escherichia coli ECOR38 0.39 HEPCGN_04090 yedK Abasic site processing protein YedK 0.35 HEPCGN_17665 ygiD 4,5-DOPA dioxygenase extradiol low > 85
Escherichia coli Nissle 1917 0.38 ECOLIN_RS11020 SOS response-associated peptidase 0.34 ECOLIN_RS17550 4,5-DOPA dioxygenase extradiol
Burkholderia phytofirmans PsJN 0.26 BPHYT_RS13760 hypothetical protein 0.45 BPHYT_RS17535 extradiol ring-cleavage dioxygenase class III protein subunit B low > 109
Rhodopseudomonas palustris CGA009 0.21 TX73_005525 SOS response-associated peptidase 0.29 TX73_022210 class III extradiol ring-cleavage dioxygenase low > 86
Pseudomonas sp. S08-1 0.18 OH686_19560 hypothetical protein 0.73 OH686_22555 hypothetical protein low > 80
Shewanella amazonensis SB2B 0.14 Sama_0315 hypothetical protein (RefSeq) 0.38 Sama_0409 hypothetical protein (RefSeq) low > 62
Magnetospirillum magneticum AMB-1 0.13 AMB_RS14585 SOS response-associated peptidase 0.36 AMB_RS01145 dioxygenase

Not shown: 2 genomes with orthologs for PS417_10240 only; 56 genomes with orthologs for PS417_08545 only