Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas simiae WCS417 | 1.0 | PS417_10240 | | hypothetical protein | 1.0 | PS417_08545 | | aromatic ring-opening dioxygenase LigB | 0.16 | 15 |
Pseudomonas fluorescens SBW25 | 0.92 | PFLU_RS14130 | | hypothetical protein | 0.94 | PFLU_RS08495 | | dioxygenase | low | > 109 |
Pseudomonas fluorescens SBW25-INTG | 0.92 | PFLU_RS14130 | | hypothetical protein | 0.94 | PFLU_RS08495 | | dioxygenase | low | > 109 |
Pseudomonas fluorescens FW300-N2E3 | 0.78 | AO353_22565 | | hypothetical protein | 0.85 | AO353_19135 | | aromatic ring-opening dioxygenase LigB | low | > 101 |
Pseudomonas fluorescens FW300-N1B4 | 0.77 | Pf1N1B4_5787 | | Gifsy-2 prophage protein | 0.83 | Pf1N1B4_264 | | FIG074102: hypothetical protein | low | > 87 |
Pseudomonas fluorescens GW456-L13 | 0.75 | PfGW456L13_3827 | | Gifsy-2 prophage protein | 0.86 | PfGW456L13_2248 | | FIG074102: hypothetical protein | low | > 87 |
Pseudomonas putida KT2440 | 0.73 | PP_2941 | | conserved protein of unknown function | 0.78 | PP_1869 | | 4,5-DOPA-dioxygenase | low | > 96 |
Pseudomonas syringae pv. syringae B728a | 0.46 | Psyr_2763 | | Protein of unknown function DUF159 | 0.79 | Psyr_3618 | | Catalytic LigB subunit of aromatic ring-opening dioxygenase | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.46 | Psyr_2763 | | Protein of unknown function DUF159 | 0.79 | Psyr_3618 | | Catalytic LigB subunit of aromatic ring-opening dioxygenase | low | > 86 |
Escherichia fergusonii Becca | 0.40 | EFB2_02014 | | SOS response-associated protein YedK | 0.33 | EFB2_00767 | | 4,5-DOPA dioxygenase extradiol | low | > 86 |
Escherichia coli ECRC102 | 0.40 | NIAGMN_02315 | yedK | Abasic site processing protein YedK | 0.34 | NIAGMN_16555 | ygiD | 4,5-DOPA dioxygenase extradiol | — | — |
Escherichia coli ECRC99 | 0.40 | KEDOAH_02355 | yedK | Abasic site processing protein YedK | 0.34 | KEDOAH_09355 | ygiD | 4,5-DOPA dioxygenase extradiol | — | — |
Escherichia coli ECRC101 | 0.40 | MCAODC_19655 | yedK | Abasic site processing protein YedK | 0.34 | MCAODC_09305 | ygiD | 4,5-DOPA dioxygenase extradiol | — | — |
Escherichia coli ECRC101 | 0.40 | OKFHMN_25735 | yedK | Abasic site processing protein YedK | 0.34 | OKFHMN_18790 | ygiD | 4,5-DOPA dioxygenase extradiol | — | — |
Escherichia coli ECRC98 | 0.40 | JDDGAC_00325 | yedK | Abasic site processing protein YedK | 0.34 | JDDGAC_22425 | ygiD | 4,5-DOPA dioxygenase extradiol | — | — |
Enterobacter sp. TBS_079 | 0.39 | MPMX20_04740 | | SOS response-associated protein YedK | 0.35 | MPMX20_03885 | | 4,5-DOPA dioxygenase extradiol | low | > 85 |
Escherichia coli BW25113 | 0.39 | b1931 | yedK | hypothetical protein (NCBI) | 0.35 | b3039 | ygiD | predicted dioxygenase (RefSeq) | low | > 76 |
Escherichia coli ECRC62 | 0.39 | BNILDI_15145 | yedK | Abasic site processing protein YedK | 0.35 | BNILDI_00920 | ygiD | 4,5-DOPA dioxygenase extradiol | — | — |
Escherichia coli ECOR27 | 0.39 | NOLOHH_16355 | yedK | Abasic site processing protein YedK | 0.35 | NOLOHH_10595 | ygiD | 4,5-DOPA dioxygenase extradiol | — | — |
Enterobacter asburiae PDN3 | 0.39 | EX28DRAFT_1259 | | Uncharacterized conserved protein | 0.35 | EX28DRAFT_3076 | | Uncharacterized conserved protein | low | > 76 |
Escherichia coli ECOR38 | 0.39 | HEPCGN_04090 | yedK | Abasic site processing protein YedK | 0.35 | HEPCGN_17665 | ygiD | 4,5-DOPA dioxygenase extradiol | low | > 85 |
Escherichia coli Nissle 1917 | 0.38 | ECOLIN_RS11020 | | SOS response-associated peptidase | 0.34 | ECOLIN_RS17550 | | 4,5-DOPA dioxygenase extradiol | — | — |
Burkholderia phytofirmans PsJN | 0.26 | BPHYT_RS13760 | | hypothetical protein | 0.45 | BPHYT_RS17535 | | extradiol ring-cleavage dioxygenase class III protein subunit B | low | > 109 |
Rhodopseudomonas palustris CGA009 | 0.21 | TX73_005525 | | SOS response-associated peptidase | 0.29 | TX73_022210 | | class III extradiol ring-cleavage dioxygenase | low | > 86 |
Pseudomonas sp. S08-1 | 0.18 | OH686_19560 | | hypothetical protein | 0.73 | OH686_22555 | | hypothetical protein | low | > 80 |
Shewanella amazonensis SB2B | 0.14 | Sama_0315 | | hypothetical protein (RefSeq) | 0.38 | Sama_0409 | | hypothetical protein (RefSeq) | low | > 62 |
Magnetospirillum magneticum AMB-1 | 0.13 | AMB_RS14585 | | SOS response-associated peptidase | 0.36 | AMB_RS01145 | | dioxygenase | — | — |
Not shown: 2 genomes with orthologs for PS417_10240 only; 56 genomes with orthologs for PS417_08545 only