Conservation of cofitness between ECD_02979 and ECD_03627 in Escherichia coli BL21

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02979 L-serine dehydratase 3, anaerobic 1.0 ECD_03627 transcriptional activator of asnA; autorepressor 0.49 2
Escherichia coli ECOR38 1.00 HEPCGN_17260 tdcG L-serine ammonia-lyase 1.00 HEPCGN_13490 asnC transcriptional regulator AsnC low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00588 L-serine dehydratase TdcG 1.00 OHPLBJKB_04310 Regulatory protein AsnC low > 73
Escherichia coli BW25113 1.00 b4471 tdcG L-serine dehydratase 3 (NCBI) 1.00 b3743 asnC DNA-binding transcriptional dual regulator (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_01320 tdcG L-serine ammonia-lyase 1.00 BNILDI_04615 asnC transcriptional regulator AsnC low > 75
Escherichia coli ECOR27 1.00 NOLOHH_10205 tdcG L-serine ammonia-lyase 1.00 NOLOHH_06910 asnC transcriptional regulator AsnC low > 75
Escherichia coli ECRC101 0.99 MCAODC_08940 tdcG L-serine ammonia-lyase 1.00 MCAODC_05280 asnC transcriptional regulator AsnC low > 87
Escherichia coli ECRC99 0.99 KEDOAH_09720 tdcG L-serine ammonia-lyase 1.00 KEDOAH_13375 asnC transcriptional regulator AsnC — —
Escherichia fergusonii Becca 0.99 EFB2_00702 L-serine dehydratase TdcG 1.00 EFB2_04890 Regulatory protein AsnC low > 86
Escherichia coli ECRC98 0.99 JDDGAC_22060 tdcG L-serine ammonia-lyase 1.00 JDDGAC_18395 asnC transcriptional regulator AsnC low > 86
Escherichia coli ECRC102 0.99 NIAGMN_16190 tdcG L-serine ammonia-lyase 1.00 NIAGMN_12530 asnC transcriptional regulator AsnC — —
Escherichia coli ECRC100 0.99 OKFHMN_18425 tdcG L-serine ammonia-lyase 1.00 OKFHMN_14775 asnC transcriptional regulator AsnC low > 80
Escherichia coli Nissle 1917 0.99 ECOLIN_RS17915 L-serine ammonia-lyase 1.00 ECOLIN_RS21525 transcriptional regulator AsnC low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF3206 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) 0.98 GFF1714 Regulatory protein AsnC low > 78
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_1339 L-serine dehydratase, iron-sulfur-dependent, single chain form 0.60 B158DRAFT_1998 Transcriptional regulators low > 40
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS19060 L-serine ammonia-lyase 0.23 ABZR86_RS16550 Lrp/AsnC family transcriptional regulator low > 74
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS05255 L-serine ammonia-lyase 0.24 LRK54_RS10740 Lrp/AsnC family transcriptional regulator low > 59
Rhodanobacter denitrificans MT42 0.52 LRK55_RS05035 L-serine ammonia-lyase 0.24 LRK55_RS10380 Lrp/AsnC family transcriptional regulator — —
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_01565 sdaA L-serine ammonia-lyase 0.23 OKGIIK_13155 AsnC family transcriptional regulator low > 52
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_03505 serine dehydratase 0.20 AO353_22665 AsnC family transcriptional regulator low > 101
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_3522 L-serine ammonia-lyase 0.20 Psyr_4299 transcriptional regulator, AsnC family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_3522 L-serine ammonia-lyase 0.20 Psyr_4299 transcriptional regulator, AsnC family low > 86
Bacteroides thetaiotaomicron VPI-5482 0.31 BT4678 L-serine dehydratase (NCBI ptt file) 0.35 BT2978 transcriptional regulator (NCBI ptt file) — —
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS12245 L-serine ammonia-lyase 0.34 ABI39_RS04730 Lrp/AsnC ligand binding domain-containing protein low > 72
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS16410 L-serine ammonia-lyase 0.34 HMPREF1058_RS12070 Lrp/AsnC ligand binding domain-containing protein low > 67
Bacteroides stercoris CC31F 0.30 HMPREF1181_RS11755 L-serine ammonia-lyase 0.35 HMPREF1181_RS01345 Lrp/AsnC ligand binding domain-containing protein low > 56
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS01410 L-serine ammonia-lyase 0.34 HMPREF1078_RS11155 Lrp/AsnC ligand binding domain-containing protein low > 61

Not shown: 8 genomes with orthologs for ECD_02979 only; 28 genomes with orthologs for ECD_03627 only