Conservation of cofitness between ECD_03733 and ECD_03488 in Escherichia coli BL21

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03733 transcription antitermination protein 1.0 ECD_03488 UDP-glucose:(heptosyl)lipopolysaccharide alpha-1,3-glucosyltransferase; lipopolysaccharide core biosynthesis protein; lipopolysaccharide glucosyltransferase I 0.79 12
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04211 Transcription antitermination protein RfaH 0.99 OHPLBJKB_00071 Lipopolysaccharide core biosynthesis protein RfaG low > 73
Escherichia coli ECRC102 1.00 NIAGMN_12020 rfaH transcription/translation regulatory transformer protein RfaH 0.99 NIAGMN_13415 rfaG Lipopolysaccharide core biosynthesis protein RfaG — —
Escherichia coli ECRC98 1.00 JDDGAC_17890 rfaH transcription/translation regulatory transformer protein RfaH 0.99 JDDGAC_19280 rfaG Lipopolysaccharide core biosynthesis protein RfaG — —
Escherichia coli BW25113 1.00 b3842 rfaH transcriptional activator RfaH (NCBI) 0.91 b3631 rfaG glucosyltransferase I (NCBI) 0.84 2
Escherichia coli ECRC101 1.00 MCAODC_04770 rfaH transcription/translation regulatory transformer protein RfaH 0.99 MCAODC_06165 rfaG Lipopolysaccharide core biosynthesis protein RfaG — —
Escherichia coli ECRC62 1.00 BNILDI_05135 rfaH transcription/translation regulatory transformer protein RfaH 0.99 BNILDI_03980 rfaG Lipopolysaccharide core biosynthesis protein RfaG — —
Escherichia coli ECOR27 1.00 NOLOHH_06395 rfaH transcription/translation regulatory transformer protein RfaH 1.00 NOLOHH_07535 rfaG Lipopolysaccharide core biosynthesis protein RfaG low > 57
Escherichia coli ECRC99 1.00 KEDOAH_13885 rfaH transcription/translation regulatory transformer protein RfaH 0.99 KEDOAH_12495 rfaG Lipopolysaccharide core biosynthesis protein RfaG — —
Escherichia coli ECRC101 1.00 OKFHMN_14265 rfaH transcription/translation regulatory transformer protein RfaH 0.99 OKFHMN_15655 rfaG Lipopolysaccharide core biosynthesis protein RfaG — —
Escherichia coli ECOR38 1.00 HEPCGN_12895 rfaH transcription/translation regulatory transformer protein RfaH 0.99 HEPCGN_14480 rfaG Lipopolysaccharide core biosynthesis protein RfaG 0.69 43
Escherichia fergusonii Becca 1.00 EFB2_04775 Transcription antitermination protein RfaH 1.00 EFB2_00182 Lipopolysaccharide core biosynthesis protein RfaG 0.76 20
Escherichia coli Nissle 1917 1.00 ECOLIN_RS22150 transcription/translation regulatory transformer protein RfaH 1.00 ECOLIN_RS20695 glycosyltransferase family 4 protein low > 52
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF267 Transcriptional activator RfaH 0.90 GFF380 UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG (EC 2.4.1.-) 0.67 10
Enterobacter asburiae PDN3 0.85 EX28DRAFT_4505 transcription elongation factor/antiterminator RfaH 0.12 EX28DRAFT_3879 Glycosyltransferase low > 76
Enterobacter sp. TBS_079 0.85 MPMX20_04440 Transcription antitermination protein RfaH 0.12 MPMX20_00106 Lipopolysaccharide core biosynthesis protein RfaG 0.45 5
Klebsiella michiganensis M5al 0.84 BWI76_RS01340 transcription/translation regulatory transformer protein RfaH 0.13 BWI76_RS27300 glucuronic acid transferase — —
Pantoea sp. MT58 0.76 IAI47_18250 transcription/translation regulatory transformer protein RfaH 0.12 IAI47_00655 glycosyltransferase family 4 protein low > 76
Serratia liquefaciens MT49 0.76 IAI46_01105 transcription/translation regulatory transformer protein RfaH 0.11 IAI46_24780 glycosyltransferase family 4 protein — —
Erwinia tracheiphila SCR3 0.74 LU632_RS23970 rfaH transcription/translation regulatory transformer protein RfaH 0.13 LU632_RS21955 glycosyltransferase family 4 protein low > 74
Dickeya dianthicola ME23 0.73 DZA65_RS00995 transcription/translation regulatory transformer protein RfaH 0.13 DZA65_RS00805 glycosyltransferase family 4 protein — —
Dickeya dianthicola 67-19 0.73 HGI48_RS00935 transcription/translation regulatory transformer protein RfaH 0.13 HGI48_RS00750 glycosyltransferase family 4 protein — —
Rahnella sp. WP5 0.73 EX31_RS14590 transcription/translation regulatory transformer protein RfaH 0.14 EX31_RS14435 glycosyltransferase family 4 protein low > 89
Dickeya dadantii 3937 0.73 DDA3937_RS20290 transcription/translation regulatory transformer protein RfaH 0.14 DDA3937_RS20460 glycosyltransferase family 4 protein — —
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_5950 Transcriptional activator RfaH 0.50 Pf1N1B4_1471 UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG (EC 2.4.1.-) — —
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_3226 Transcriptional activator RfaH 0.51 Psyr_0522 Glycosyl transferase, group 1 — —
Pseudomonas stutzeri RCH2 0.29 Psest_2605 transcriptional activator RfaH 0.51 Psest_0453 Glycosyltransferase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_3226 Transcriptional activator RfaH 0.51 Psyr_0522 Glycosyl transferase, group 1 — —
Castellaniella sp019104865 MT123 0.16 ABCV34_RS12845 transcription termination/antitermination NusG family protein 0.11 ABCV34_RS02455 glycosyltransferase family 4 protein low > 48

Not shown: 11 genomes with orthologs for ECD_03733 only; 14 genomes with orthologs for ECD_03488 only