Conservation of cofitness between ECD_03574 and ECD_03348 in Escherichia coli BL21

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03574 D-galactonate transporter 1.0 ECD_03348 23S rRNA m(6)A2030 methyltransferase, SAM-dependent low > 61
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21260 MFS transporter 1.00 ECOLIN_RS19990 23S rRNA (adenine(2030)-N(6))-methyltransferase low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00012 D-galactonate transporter 0.99 OHPLBJKB_00204 Ribosomal RNA large subunit methyltransferase J low > 73
Escherichia coli BW25113 1.00 b3691 dgoT D-galactonate transport (VIMSS) 0.99 b3499 yhiR predicted DNA (exogenous) processing protein (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_13780 dgoT D-galactonate transporter 0.99 HEPCGN_15320 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase low > 87
Escherichia coli ECRC62 1.00 BNILDI_04315 dgoT D-galactonate transporter 1.00 BNILDI_03215 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase low > 75
Escherichia fergusonii Becca 0.99 EFB2_00012 D-galactonate transporter 1.00 EFB2_00316 Ribosomal RNA large subunit methyltransferase J low > 86
Escherichia coli ECOR27 0.99 NOLOHH_07215 dgoT D-galactonate transporter 1.00 NOLOHH_08345 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase low > 75
Enterobacter sp. TBS_079 0.94 MPMX20_00012 D-galactonate transporter 0.94 MPMX20_04398 Ribosomal RNA large subunit methyltransferase J low > 85
Enterobacter asburiae PDN3 0.94 EX28DRAFT_3978 phosphoglycerate transporter family protein/D-galactonate transporter 0.94 EX28DRAFT_4062 Protein involved in catabolism of external DNA low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF1766 D-galactonate transporter 0.95 GFF515 Protein involved in catabolism of external DNA low > 78
Pantoea sp. MT58 0.87 IAI47_00050 MFS transporter 0.81 IAI47_01340 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 76
Dickeya dianthicola ME23 0.85 DZA65_RS07290 MFS transporter 0.82 DZA65_RS00045 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 75
Dickeya dianthicola 67-19 0.85 HGI48_RS06945 MFS transporter 0.82 HGI48_RS00055 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 71
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_2130 Hexuronate transporter 0.41 PfGW456L13_219 Protein involved in catabolism of external DNA low > 87
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_397 Hexuronate transporter 0.41 Pf1N1B4_1481 Protein involved in catabolism of external DNA low > 87
Pseudomonas simiae WCS417 0.56 PS417_00170 glucarate transporter 0.41 PS417_02200 lactate dehydrogenase — —
Pseudomonas sp. RS175 0.56 PFR28_02984 D-galactonate transporter 0.42 PFR28_05056 Ribosomal RNA large subunit methyltransferase J low > 88
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_20295 glucarate transporter 0.41 AO356_08990 lactate dehydrogenase low > 104
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_1990 D-galactonate transporter 0.40 Psyr_4772 Protein of unknown function DUF519 low > 86
Pseudomonas fluorescens SBW25 0.56 PFLU_RS00165 MFS transporter 0.41 PFLU_RS02255 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_1990 D-galactonate transporter 0.40 Psyr_4772 Protein of unknown function DUF519 low > 86
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS00165 MFS transporter 0.41 PFLU_RS02255 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 109
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_5978 Hexuronate transporter 0.41 Pf6N2E2_3679 Protein involved in catabolism of external DNA low > 103
Acinetobacter radioresistens SK82 0.14 MPMX26_01890 D-galactonate transporter 0.38 MPMX26_02660 Ribosomal RNA large subunit methyltransferase J — —
Pseudomonas sp. S08-1 0.14 OH686_06110 Uncharacterized MFS-type transporter 0.42 OH686_09780 23S rRNA (adenine(2030)-N(6))-methyltransferase low > 80
Rhodopseudomonas palustris CGA009 0.14 TX73_024990 MFS transporter 0.35 TX73_006025 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ low > 86

Not shown: 2 genomes with orthologs for ECD_03574 only; 54 genomes with orthologs for ECD_03348 only