Conservation of cofitness between ECD_02735 and ECD_03184 in Escherichia coli BL21

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02735 glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex 1.0 ECD_03184 general secretory pathway component, cryptic low > 61
Escherichia coli BW25113 1.00 b2903 gcvP glycine dehydrogenase (NCBI) 0.99 b3333 yheK putative general protein secretion protein (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00812 Glycine dehydrogenase (decarboxylating) 0.99 OHPLBJKB_00370 Putative type II secretion system protein L low > 73
Escherichia coli Nissle 1917 0.99 ECOLIN_RS16165 aminomethyl-transferring glycine dehydrogenase 0.90 ECOLIN_RS19100 type II secretion system protein GspL low > 55
Escherichia fergusonii Becca 0.99 EFB2_00999 Glycine dehydrogenase (decarboxylating) 0.90 EFB2_00490 Putative type II secretion system protein L low > 86
Enterobacter sp. TBS_079 0.89 MPMX20_03762 Glycine dehydrogenase (decarboxylating) 0.18 MPMX20_01523 Putative type II secretion system protein L low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS23870 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.07 BWI76_RS05050 general secretion pathway protein GspL low > 92
Enterobacter asburiae PDN3 0.88 EX28DRAFT_2955 glycine dehydrogenase (decarboxylating) 0.16 EX28DRAFT_2071 Type II secretory pathway, component PulL low > 76
Rahnella sp. WP5 0.81 EX31_RS21520 aminomethyl-transferring glycine dehydrogenase 0.19 EX31_RS16205 type II secretion system protein GspL low > 89
Pectobacterium carotovorum WPP14 0.80 HER17_RS17995 aminomethyl-transferring glycine dehydrogenase 0.08 HER17_RS06725 type II secretion system protein GspL low > 75
Dickeya dadantii 3937 0.80 DDA3937_RS03255 aminomethyl-transferring glycine dehydrogenase 0.11 DDA3937_RS14760 type II secretion system protein GspL low > 74
Dickeya dianthicola 67-19 0.80 HGI48_RS03400 aminomethyl-transferring glycine dehydrogenase 0.11 HGI48_RS14695 type II secretion system protein GspL low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS03445 aminomethyl-transferring glycine dehydrogenase 0.11 DZA65_RS15640 type II secretion system protein GspL 0.43 34
Shewanella amazonensis SB2B 0.68 Sama_2719 glycine dehydrogenase (RefSeq) 0.10 Sama_0177 general secretion pathway protein L (RefSeq) — —
Shewanella sp. ANA-3 0.67 Shewana3_3499 glycine dehydrogenase (RefSeq) 0.11 Shewana3_0159 general secretion pathway protein L (RefSeq) low > 73
Shewanella oneidensis MR-1 0.67 SO0781 gcvP glycine cleavage system P protein (NCBI ptt file) 0.11 SO0174 gspL general secretion pathway protein L (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.66 Shew_3062 glycine dehydrogenase (RefSeq) 0.10 Shew_3611 general secretion pathway protein L (RefSeq) low > 60
Pseudomonas stutzeri RCH2 0.62 Psest_0183 glycine dehydrogenase (decarboxylating) 0.08 Psest_4195 general secretion pathway protein L low > 67

Not shown: 68 genomes with orthologs for ECD_02735 only; 0 genomes with orthologs for ECD_03184 only