Conservation of cofitness between ECD_03780 and ECD_03076 in Escherichia coli BL21

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03780 formate dehydrogenase formation protein 1.0 ECD_03076 putative Fe-S oxidoreductase, Radical SAM superfamily protein 0.43 10
Escherichia coli BW25113 0.99 b3895 fdhD formate dehydrogenase accessory protein (NCBI) 1.00 b3211 yhcC predicted Fe-S oxidoreductase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_04155 Sulfur carrier protein FdhD 1.00 OHPLBJKB_00489 hypothetical protein low > 73
Escherichia coli ECRC99 0.99 KEDOAH_14205 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 1.00 KEDOAH_10260 yhcC TIGR01212 family radical SAM protein — —
Escherichia coli ECRC102 0.99 NIAGMN_11705 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 1.00 NIAGMN_15650 yhcC TIGR01212 family radical SAM protein — —
Escherichia coli ECOR38 0.99 HEPCGN_12585 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 1.00 HEPCGN_16765 yhcC TIGR01212 family radical SAM protein low > 85
Escherichia coli ECRC101 0.99 OKFHMN_13950 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 1.00 OKFHMN_17890 yhcC TIGR01212 family radical SAM protein — —
Escherichia coli ECOR27 0.99 NOLOHH_06070 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 1.00 NOLOHH_09690 yhcC TIGR01212 family radical SAM protein low > 57
Escherichia coli ECRC101 0.99 MCAODC_04450 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 1.00 MCAODC_08410 yhcC TIGR01212 family radical SAM protein — —
Escherichia coli Nissle 1917 0.99 ECOLIN_RS22460 formate dehydrogenase accessory sulfurtransferase FdhD 0.99 ECOLIN_RS18470 TIGR01212 family radical SAM protein low > 52
Escherichia fergusonii Becca 0.99 EFB2_04720 Sulfur carrier protein FdhD 0.99 EFB2_00612 hypothetical protein low > 86
Escherichia coli ECRC62 0.99 BNILDI_05455 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 1.00 BNILDI_01845 yhcC TIGR01212 family radical SAM protein — —
Escherichia coli ECRC98 0.98 JDDGAC_17575 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 1.00 JDDGAC_21515 yhcC TIGR01212 family radical SAM protein — —
Klebsiella michiganensis M5al 0.83 BWI76_RS00475 sulfurtransferase FdhD 0.90 BWI76_RS25305 TIGR01212 family radical SAM protein low > 92
Enterobacter asburiae PDN3 0.78 EX28DRAFT_4379 formate dehydrogenase family accessory protein FdhD 0.92 EX28DRAFT_3274 radical SAM protein, TIGR01212 family low > 76
Enterobacter sp. TBS_079 0.78 MPMX20_04574 Sulfur carrier protein FdhD 0.92 MPMX20_04125 hypothetical protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2254 Formate dehydrogenase chain D (EC 1.2.1.2) 0.95 GFF2955 COG1242: Predicted Fe-S oxidoreductase low > 78
Pectobacterium carotovorum WPP14 0.72 HER17_RS21105 formate dehydrogenase accessory sulfurtransferase FdhD 0.82 HER17_RS19905 TIGR01212 family radical SAM protein low > 75
Serratia liquefaciens MT49 0.71 IAI46_00205 formate dehydrogenase accessory sulfurtransferase FdhD 0.76 IAI46_22340 TIGR01212 family radical SAM protein low > 86
Dickeya dadantii 3937 0.71 DDA3937_RS20955 formate dehydrogenase accessory sulfurtransferase FdhD 0.79 DDA3937_RS01670 TIGR01212 family radical SAM protein low > 74
Dickeya dianthicola ME23 0.70 DZA65_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD 0.79 DZA65_RS01640 TIGR01212 family radical SAM protein low > 75
Dickeya dianthicola 67-19 0.70 HGI48_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD 0.79 HGI48_RS01565 TIGR01212 family radical SAM protein low > 71
Shewanella sp. ANA-3 0.43 Shewana3_0108 formate dehydrogenase accessory protein (RefSeq) 0.58 Shewana3_3048 putative radical SAM protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.43 SO0107 fdhD formate dehydrogenase accessory protein FdhD (NCBI ptt file) 0.58 SO1326 conserved hypothetical protein (NCBI ptt file) low > 76
Mucilaginibacter yixingensis YX-36 DSM 26809 0.18 ABZR88_RS07865 formate dehydrogenase accessory sulfurtransferase FdhD 0.27 ABZR88_RS04765 TIGR01212 family radical SAM protein low > 71
Desulfovibrio vulgaris Hildenborough JW710 0.12 DVU0578 formate dehydrogenase accessory protein FdhD, putative (TIGR) 0.30 DVU0790 radical SAM protein, TIGR01212 family (TIGR) low > 55
Shewanella amazonensis SB2B 0.12 Sama_3619 formate dehydrogenase accessory protein FdhD, putative (RefSeq) 0.51 Sama_0858 hypothetical protein (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.11 CSW01_07625 sulfurtransferase FdhD 0.70 CSW01_12015 TIGR01212 family radical SAM protein low > 62
Shewanella loihica PV-4 0.11 Shew_0053 formate dehydrogenase, subunit FdhD (RefSeq) 0.52 Shew_1033 putative radical SAM protein (RefSeq) low > 60

Not shown: 45 genomes with orthologs for ECD_03780 only; 10 genomes with orthologs for ECD_03076 only