Conservation of cofitness between ECD_00877 and ECD_02930 in Escherichia coli BL21

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00877 HCP oxidoreductase, NADH-dependent 1.0 ECD_02930 transcriptional activator of ttdABT 0.35 41
Escherichia coli ECOR27 1.00 NOLOHH_22235 hcr NADH oxidoreductase 1.00 NOLOHH_10480 ttdR DNA-binding transcriptional activator TtdR low > 75
Escherichia coli BW25113 1.00 b0872 hcr HCP oxidoreductase, NADH-dependent (NCBI) 1.00 b3060 ygiP predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_20490 hcr NADH oxidoreductase 1.00 BNILDI_01035 ttdR DNA-binding transcriptional activator TtdR low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS04640 NADH oxidoreductase 1.00 ECOLIN_RS17670 L-tartrate utilization transcriptional activator TtdR low > 55
Escherichia fergusonii Becca 0.99 EFB2_03189 NADH oxidoreductase HCR 1.00 EFB2_00751 HTH-type transcriptional regulator DmlR low > 86
Escherichia coli ECOR38 0.99 HEPCGN_02175 hcr NADH oxidoreductase 1.00 HEPCGN_17545 ttdR DNA-binding transcriptional activator TtdR low > 87
Escherichia coli ECRC100 0.99 OKFHMN_05840 hcr NADH oxidoreductase 1.00 OKFHMN_18690 ttdR DNA-binding transcriptional activator TtdR low > 80
Escherichia coli ECRC99 0.99 KEDOAH_22070 hcr NADH oxidoreductase 1.00 KEDOAH_09455 ttdR DNA-binding transcriptional activator TtdR — —
Escherichia coli ECRC98 0.99 JDDGAC_09475 hcr NADH oxidoreductase 1.00 JDDGAC_22325 ttdR DNA-binding transcriptional activator TtdR low > 86
Escherichia coli ECRC102 0.99 NIAGMN_03880 hcr NADH oxidoreductase 1.00 NIAGMN_16455 ttdR DNA-binding transcriptional activator TtdR — —
Escherichia coli ECRC101 0.99 MCAODC_25055 hcr NADH oxidoreductase 1.00 MCAODC_09205 ttdR DNA-binding transcriptional activator TtdR low > 87
Enterobacter sp. TBS_079 0.91 MPMX20_01534 NADH oxidoreductase HCR 0.40 MPMX20_03495 HTH-type transcriptional regulator DmlR low > 85
Pectobacterium carotovorum WPP14 0.62 HER17_RS12430 NADH oxidoreductase 0.27 HER17_RS03700 LysR family transcriptional regulator low > 75
Shewanella sp. ANA-3 0.27 Shewana3_3010 oxidoreductase FAD-binding subunit (RefSeq) 0.24 Shewana3_0407 LysR family transcriptional regulator (RefSeq) low > 73
Shewanella amazonensis SB2B 0.26 Sama_0896 iron-sulfur cluster-binding protein (RefSeq) 0.25 Sama_3218 LysR family transcriptional regulator (RefSeq) low > 62
Ralstonia solanacearum GMI1000 0.23 RS_RS17500 hybrid-cluster NAD(P)-dependent oxidoreductase 0.34 RS_RS21935 LysR family transcriptional regulator low > 80
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_00630 ferredoxin 0.27 AO356_05925 LysR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_4714 GbcB Glycine betaine demethylase subunit B 0.27 Pf6N2E2_3045 Transcriptional regulator, LysR family, in formaldehyde detoxification operon 0.28 36
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_07675 ferredoxin 0.27 AO353_16575 LysR family transcriptional regulator 0.24 33
Pseudomonas putida KT2440 0.21 PP_0316 putative glycine-betaine dioxygenase subunit 0.26 PP_1615 Transcriptional regulator, LysR family low > 96
Pseudomonas sp. S08-1 0.19 OH686_04175 Flavodoxin (ferredoxin-NADPH reductases) family 1 0.26 OH686_18145 Transcriptional regulator, LysR family, in formaldehyde detoxification operon low > 80
Ralstonia solanacearum IBSBF1503 0.14 RALBFv3_RS20640 phenylacetate-CoA oxygenase/reductase subunit PaaK 0.35 RALBFv3_RS17035 LysR family transcriptional regulator low > 76
Ralstonia solanacearum UW163 0.14 UW163_RS18535 phenylacetate-CoA oxygenase/reductase subunit PaaK 0.35 UW163_RS18425 LysR family transcriptional regulator — —

Not shown: 41 genomes with orthologs for ECD_00877 only; 2 genomes with orthologs for ECD_02930 only