Conservation of cofitness between ECD_03797 and ECD_02636 in Escherichia coli BL21

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03797 sensory histidine kinase in two-component regulatory system with CpxR 1.0 ECD_02636 tRNA(Ile1,Asp) pseudouridine(65) synthase 0.53 3
Escherichia coli ECRC102 1.00 NIAGMN_11605 cpxA envelope stress sensor histidine kinase CpxA 0.99 NIAGMN_17980 truC tRNA pseudouridine(65) synthase TruC — —
Escherichia coli ECRC99 1.00 KEDOAH_14305 cpxA envelope stress sensor histidine kinase CpxA 0.99 KEDOAH_07920 truC tRNA pseudouridine(65) synthase TruC — —
Escherichia coli ECOR38 1.00 HEPCGN_12495 cpxA envelope stress sensor histidine kinase CpxA 1.00 HEPCGN_19465 truC tRNA pseudouridine(65) synthase TruC low > 87
Escherichia coli ECRC98 1.00 JDDGAC_17475 cpxA envelope stress sensor histidine kinase CpxA 0.99 JDDGAC_23875 truC tRNA pseudouridine(65) synthase TruC low > 86
Escherichia fergusonii Becca 1.00 EFB2_04706 Sensor histidine kinase CpxA 0.99 EFB2_01126 tRNA pseudouridine synthase C low > 86
Escherichia coli ECOR27 1.00 NOLOHH_05985 cpxA envelope stress sensor histidine kinase CpxA 1.00 NOLOHH_12090 truC tRNA pseudouridine(65) synthase TruC low > 75
Escherichia coli ECRC100 1.00 OKFHMN_13850 cpxA envelope stress sensor histidine kinase CpxA 0.99 OKFHMN_20210 truC tRNA pseudouridine(65) synthase TruC low > 80
Escherichia coli BW25113 1.00 b3911 cpxA two-component sensor protein (NCBI) 1.00 b2791 yqcB tRNA pseudouridine synthase (NCBI) low > 76
Escherichia coli ECRC101 1.00 MCAODC_04350 cpxA envelope stress sensor histidine kinase CpxA 0.99 MCAODC_10735 truC tRNA pseudouridine(65) synthase TruC low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04139 Sensor histidine kinase CpxA 1.00 OHPLBJKB_00940 tRNA pseudouridine synthase C low > 73
Escherichia coli ECRC62 1.00 BNILDI_05540 cpxA envelope stress sensor histidine kinase CpxA 1.00 BNILDI_10595 truC tRNA pseudouridine(65) synthase TruC low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS22535 envelope stress sensor histidine kinase CpxA 1.00 ECOLIN_RS15550 tRNA pseudouridine(65) synthase TruC low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF2279 Copper sensory histidine kinase CpxA 0.89 GFF4846 tRNA pseudouridine synthase C (EC 4.2.1.70) low > 78
Enterobacter sp. TBS_079 0.89 MPMX20_04557 Sensor histidine kinase CpxA 0.89 MPMX20_03661 tRNA pseudouridine synthase C low > 85
Enterobacter asburiae PDN3 0.88 EX28DRAFT_4386 Signal transduction histidine kinase 0.88 EX28DRAFT_2872 Pseudouridylate synthases, 23S RNA-specific — —
Klebsiella michiganensis M5al 0.87 BWI76_RS00715 two-component sensor histidine kinase 0.91 BWI76_RS22850 tRNA pseudouridine synthase TruC low > 92
Rahnella sp. WP5 0.81 EX31_RS14325 envelope stress sensor histidine kinase CpxA 0.70 EX31_RS13065 tRNA pseudouridine(65) synthase TruC low > 89
Serratia liquefaciens MT49 0.81 IAI46_24665 envelope stress sensor histidine kinase CpxA 0.74 IAI46_20290 tRNA pseudouridine(65) synthase TruC low > 86
Pantoea sp. MT58 0.80 IAI47_00755 envelope stress sensor histidine kinase CpxA 0.77 IAI47_04065 tRNA pseudouridine(65) synthase TruC low > 76
Erwinia tracheiphila SCR3 0.78 LU632_RS21860 cpxA envelope stress sensor histidine kinase CpxA 0.68 LU632_RS06295 truC tRNA pseudouridine(65) synthase TruC low > 74
Dickeya dadantii 3937 0.76 DDA3937_RS00775 envelope stress sensor histidine kinase CpxA 0.75 DDA3937_RS05085 tRNA pseudouridine(65) synthase TruC low > 74
Dickeya dianthicola ME23 0.75 DZA65_RS21615 envelope stress sensor histidine kinase CpxA 0.74 DZA65_RS05425 tRNA pseudouridine(65) synthase TruC low > 75
Dickeya dianthicola 67-19 0.75 HGI48_RS20600 envelope stress sensor histidine kinase CpxA 0.73 HGI48_RS05085 tRNA pseudouridine(65) synthase TruC low > 71
Pectobacterium carotovorum WPP14 0.75 HER17_RS00660 envelope stress sensor histidine kinase CpxA 0.73 HER17_RS16365 tRNA pseudouridine(65) synthase TruC low > 75
Vibrio cholerae E7946 ATCC 55056 0.36 CSW01_13595 two-component system sensor histidine kinase CpxA 0.63 CSW01_04555 tRNA pseudouridine(65) synthase TruC low > 62
Shewanella amazonensis SB2B 0.28 Sama_3433 sensor protein CpxA (RefSeq) 0.50 Sama_1131 pseudouridylate synthase (RefSeq) low > 62
Shewanella sp. ANA-3 0.26 Shewana3_0252 ATPase domain-containing protein (RefSeq) 0.50 Shewana3_2824 tRNA pseudouridine synthase C (RefSeq) low > 73
Shewanella loihica PV-4 0.25 Shew_3571 integral membrane sensor signal transduction histidine kinase (RefSeq) 0.47 Shew_2643 pseudouridylate synthase (RefSeq) low > 60

Not shown: 4 genomes with orthologs for ECD_03797 only; 15 genomes with orthologs for ECD_02636 only