Conservation of cofitness between ECD_00433 and ECD_02544 in Escherichia coli BL21

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00433 TraB family protein 1.0 ECD_02544 COG1238 family inner membrane protein 0.42 6
Escherichia coli BW25113 1.00 b0482 ybaP hypothetical protein (NCBI) 1.00 b2689 yqaA conserved inner membrane protein (NCBI) low > 76
Escherichia coli ECOR27 0.99 NOLOHH_01025 ybaP Uncharacterized protein YbaP 0.99 NOLOHH_12595 ygaA SNARE associated Golgi protein low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03192 hypothetical protein 1.00 OHPLBJKB_01044 Inner membrane protein YqaA low > 73
Escherichia coli ECRC101 0.99 MCAODC_27315 ybaP Uncharacterized protein YbaP 0.98 MCAODC_11280 yqaA Inner membrane protein YqaA low > 87
Escherichia coli ECRC102 0.99 NIAGMN_06145 ybaP Uncharacterized protein YbaP 0.98 NIAGMN_18525 yqaA Inner membrane protein YqaA — —
Escherichia coli ECRC98 0.99 JDDGAC_11740 ybaP Uncharacterized protein YbaP 0.98 JDDGAC_24420 yqaA Inner membrane protein YqaA low > 86
Escherichia coli ECRC100 0.99 OKFHMN_08095 ybaP Uncharacterized protein YbaP 0.98 OKFHMN_20755 yqaA Inner membrane protein YqaA low > 80
Escherichia fergusonii Becca 0.99 EFB2_03576 hypothetical protein 1.00 EFB2_01237 Inner membrane protein YqaA low > 86
Escherichia coli ECRC99 0.99 KEDOAH_19875 ybaP Uncharacterized protein YbaP 0.98 KEDOAH_07380 yqaA Inner membrane protein YqaA — —
Escherichia coli ECOR38 0.99 HEPCGN_06715 ybaP Uncharacterized protein YbaP 0.99 HEPCGN_19950 yqaA Inner membrane protein YqaA low > 87
Escherichia coli ECRC62 0.99 BNILDI_22445 ybaP Uncharacterized protein YbaP 0.99 BNILDI_11155 ygaA SNARE associated Golgi protein low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS02855 TraB/GumN family protein 1.00 ECOLIN_RS14995 YqaA family protein — —
Klebsiella michiganensis M5al 0.71 BWI76_RS06875 conjugal transfer protein TraB 0.87 BWI76_RS22125 membrane protein low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF4402 FIG00921183: possible ligase 0.83 GFF1598 Putative membrane protein low > 78
Enterobacter sp. TBS_079 0.65 MPMX20_01083 hypothetical protein 0.80 MPMX20_03569 Inner membrane protein YqaA low > 85
Enterobacter asburiae PDN3 0.64 EX28DRAFT_2475 Uncharacterized protein conserved in bacteria 0.90 EX28DRAFT_2775 Predicted membrane protein low > 76
Serratia liquefaciens MT49 0.61 IAI46_05305 TraB/GumN family protein 0.66 IAI46_03890 DedA family protein low > 86
Rahnella sp. WP5 0.56 EX31_RS22570 conjugal transfer protein TraB 0.62 EX31_RS07755 DedA family protein low > 89
Erwinia tracheiphila SCR3 0.55 LU632_RS15305 TraB/GumN family protein 0.52 LU632_RS15695 DedA family protein low > 74
Pantoea sp. MT58 0.52 IAI47_14405 TraB/GumN family protein 0.61 IAI47_04345 DedA family protein low > 76
Dickeya dadantii 3937 0.49 DDA3937_RS05840 TraB/GumN family protein 0.52 DDA3937_RS16200 DedA family protein low > 74
Dickeya dianthicola ME23 0.49 DZA65_RS06220 hypothetical protein 0.50 DZA65_RS17405 DedA family protein low > 75
Dickeya dianthicola 67-19 0.49 HGI48_RS05885 TraB/GumN family protein 0.50 HGI48_RS16310 DedA family protein low > 71
Pectobacterium carotovorum WPP14 0.46 HER17_RS15630 TraB/GumN family protein 0.55 HER17_RS05090 DedA family protein low > 75
Vibrio cholerae E7946 ATCC 55056 0.22 CSW01_11315 TraB/GumN family protein 0.38 CSW01_02960 DedA family protein low > 62
Alteromonas macleodii MIT1002 0.11 MIT1002_03727 TraB family protein 0.24 MIT1002_02311 Inner membrane protein YqaA low > 70
Shewanella oneidensis MR-1 0.11 SO0557 conserved hypothetical protein (NCBI ptt file) 0.37 SO3561 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.10 Shewana3_0556 GumN family protein (RefSeq) 0.40 Shewana3_3162 hypothetical protein (RefSeq) low > 73
Shewanella loihica PV-4 0.10 Shew_0438 GumN family protein (RefSeq) 0.33 Shew_1225 hypothetical protein (RefSeq) low > 60

Not shown: 7 genomes with orthologs for ECD_00433 only; 36 genomes with orthologs for ECD_02544 only