Conservation of cofitness between ECD_00617 and ECD_02493 in Escherichia coli BL21

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00617 ribonucleoside hydrolase 1 1.0 ECD_02493 putative membrane-anchored diguanylate cyclase 0.70 3
Escherichia coli BW25113 1.00 b0651 rihA ribonucleoside hydrolase 1 (NCBI) 1.00 b2604 yfiN predicted diguanylate cyclase (NCBI) low > 76
Escherichia coli ECRC101 1.00 MCAODC_26490 rihA pyrimidine-specific ribonucleoside hydrolase RihA 0.98 MCAODC_11730 dgcN diguanylate cyclase DgcN — —
Escherichia coli ECRC102 1.00 NIAGMN_05330 rihA pyrimidine-specific ribonucleoside hydrolase RihA 0.98 NIAGMN_18970 dgcN diguanylate cyclase DgcN — —
Escherichia coli ECRC98 1.00 JDDGAC_10920 rihA pyrimidine-specific ribonucleoside hydrolase RihA 0.98 JDDGAC_24865 dgcN diguanylate cyclase DgcN — —
Escherichia coli ECRC99 1.00 KEDOAH_20695 rihA pyrimidine-specific ribonucleoside hydrolase RihA 0.98 KEDOAH_07020 dgcN diguanylate cyclase DgcN — —
Escherichia coli ECRC101 1.00 OKFHMN_07275 rihA pyrimidine-specific ribonucleoside hydrolase RihA 0.98 OKFHMN_21200 dgcN diguanylate cyclase DgcN — —
Escherichia coli ECOR27 0.99 NOLOHH_23660 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 NOLOHH_12875 dgcN diguanylate cyclase DgcN low > 57
Escherichia coli ECRC62 0.99 BNILDI_21670 rihA pyrimidine-specific ribonucleoside hydrolase RihA 1.00 BNILDI_11680 dgcN diguanylate cyclase DgcN — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03062 Pyrimidine-specific ribonucleoside hydrolase RihA 1.00 OHPLBJKB_01102 Diguanylate cyclase DgcN low > 73
Escherichia coli ECOR38 0.99 HEPCGN_00955 rihA pyrimidine-specific ribonucleoside hydrolase RihA 0.85 HEPCGN_20320 dgcN diguanylate cyclase DgcN low > 85
Escherichia coli Nissle 1917 0.99 ECOLIN_RS03505 pyrimidine-specific ribonucleoside hydrolase RihA 0.99 ECOLIN_RS14720 diguanylate cyclase DgcN low > 52
Escherichia fergusonii Becca 0.99 EFB2_03448 Pyrimidine-specific ribonucleoside hydrolase RihA 0.98 EFB2_01288 Diguanylate cyclase DgcN low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF4569 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.69 GFF4174 Inner membrane protein YfiN low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS13490 pyrimidine-specific ribonucleoside hydrolase RihA 0.62 BWI76_RS21490 GGDEF domain-containing protein low > 92
Enterobacter sp. TBS_079 0.89 MPMX20_01302 Pyrimidine-specific ribonucleoside hydrolase RihA 0.66 MPMX20_03472 Diguanylate cyclase DgcN low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_2320 Inosine-uridine nucleoside N-ribohydrolase 0.67 EX28DRAFT_2705 diguanylate cyclase (GGDEF) domain low > 76
Serratia liquefaciens MT49 0.62 IAI46_05975 pyrimidine-specific ribonucleoside hydrolase RihA 0.33 IAI46_02975 diguanylate cyclase low > 86
Rahnella sp. WP5 0.40 EX31_RS20270 nucleoside hydrolase 0.31 EX31_RS04230 diguanylate cyclase low > 89
Pseudomonas fluorescens FW300-N2E3 0.34 AO353_20845 uridine/adenosine nucleosidase (EC 3.2.2.3; EC 3.2.2.7) (from data) 0.28 AO353_06010 diguanylate cyclase low > 101
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_6029 uridine nucleosidase (EC 3.2.2.3) (from data) 0.27 Pf1N1B4_1232 Inner membrane protein YfiN low > 87
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_167 Inosine-uridine preferring nucleoside hydrolase (EC 3.2.2.1) 0.26 Pf6N2E2_3456 Inner membrane protein YfiN low > 103
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_00940 uridine/adenosine nucleosidase (EC 3.2.2.3; EC 3.2.2.7) (from data) 0.25 AO356_07900 diguanylate cyclase low > 104
Pseudomonas sp. RS175 0.33 PFR28_02731 Pyrimidine-specific ribonucleoside hydrolase RihB 0.26 PFR28_00010 Diguanylate cyclase DgcN low > 88
Pseudomonas simiae WCS417 0.33 PS417_18375 hypothetical protein 0.29 PS417_23760 DeoR faimly transcriptional regulator low > 88
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS20350 nucleoside hydrolase 0.29 PFLU_RS25575 diguanylate cyclase low > 109
Pseudomonas fluorescens SBW25 0.33 PFLU_RS20350 nucleoside hydrolase 0.29 PFLU_RS25575 diguanylate cyclase low > 109
Pseudomonas putida KT2440 0.33 PP_2460 ribonucleoside hydrolase 0.26 PP_4670 diguanylate cyclase low > 96

Not shown: 21 genomes with orthologs for ECD_00617 only; 6 genomes with orthologs for ECD_02493 only