Conservation of cofitness between ECD_04011 and ECD_02118 in Escherichia coli BL21

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_04011 putative transporter 1.0 ECD_02118 essential inner membrane DUF3413 domain-containing protein; lipid A production and membrane permeability factor low > 61
Escherichia coli ECRC101 1.00 MCAODC_02930 yjeH L-methionine/branched-chain amino acid transporter 1.00 MCAODC_14385 yejM LPS biosynthesis-modulating metalloenzyme YejM low > 87
Escherichia coli ECRC100 1.00 OKFHMN_12420 yjeH L-methionine/branched-chain amino acid transporter 1.00 OKFHMN_23335 yejM LPS biosynthesis-modulating metalloenzyme YejM low > 80
Escherichia coli ECRC102 1.00 NIAGMN_10265 yjeH L-methionine/branched-chain amino acid transporter 1.00 NIAGMN_21100 yejM LPS biosynthesis-modulating metalloenzyme YejM — —
Escherichia coli ECRC98 1.00 JDDGAC_16055 yjeH L-methionine/branched-chain amino acid transporter 1.00 JDDGAC_27295 yejM LPS biosynthesis-modulating metalloenzyme YejM low > 86
Escherichia coli ECRC99 1.00 KEDOAH_15745 yjeH L-methionine/branched-chain amino acid transporter 1.00 KEDOAH_04850 yejM LPS biosynthesis-modulating metalloenzyme YejM — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03902 L-methionine/branched-chain amino acid exporter YjeH 1.00 OHPLBJKB_01521 Inner membrane protein YejM low > 73
Escherichia coli ECRC62 0.99 BNILDI_06805 yjeH L-methionine/branched-chain amino acid transporter 1.00 BNILDI_13830 yejM LPS biosynthesis-modulating metalloenzyme YejM low > 75
Escherichia coli BW25113 0.99 b4141 yjeH predicted transporter (NCBI) 1.00 b2188 yejM predicted hydrolase, inner membrane (NCBI) low > 76
Escherichia coli Nissle 1917 0.99 ECOLIN_RS24055 L-methionine/branched-chain amino acid transporter 1.00 ECOLIN_RS12785 LPS biosynthesis-modulating metalloenzyme YejM — —
Escherichia coli ECOR27 0.99 NOLOHH_04685 yjeH L-methionine/branched-chain amino acid transporter 1.00 NOLOHH_14910 yejM LPS biosynthesis-modulating metalloenzyme YejM low > 75
Escherichia coli ECOR38 0.99 HEPCGN_10645 yjeH L-methionine/branched-chain amino acid transporter 1.00 HEPCGN_22600 yejM LPS biosynthesis-modulating metalloenzyme YejM low > 87
Escherichia fergusonii Becca 0.99 EFB2_04394 L-methionine/branched-chain amino acid exporter YjeH 1.00 EFB2_01668 Inner membrane protein YejM low > 86
Klebsiella michiganensis M5al 0.82 BWI76_RS02345 L-methionine/branched-chain amino acid transporter 0.83 BWI76_RS19845 phosphatase low > 92
Enterobacter sp. TBS_079 0.78 MPMX20_00421 L-methionine/branched-chain amino acid exporter YjeH 0.85 MPMX20_03154 Inner membrane protein YejM low > 85
Enterobacter asburiae PDN3 0.73 EX28DRAFT_3338 Amino acid transporters 0.86 EX28DRAFT_0373 Predicted hydrolase of alkaline phosphatase superfamily low > 76
Serratia liquefaciens MT49 0.70 IAI46_22050 L-methionine/branched-chain amino acid transporter 0.63 IAI46_17370 DUF3413 domain-containing protein low > 86
Rahnella sp. WP5 0.69 EX31_RS08135 L-methionine/branched-chain amino acid transporter 0.64 EX31_RS19220 DUF3413 domain-containing protein low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF2011 Putative permease 0.90 GFF3747 FIG001881: hydrolase of alkaline phosphatase superfamily low > 78
Pectobacterium carotovorum WPP14 0.62 HER17_RS17155 L-methionine/branched-chain amino acid transporter 0.60 HER17_RS12985 LPS biosynthesis-modulating metalloenzyme YejM low > 75
Dickeya dadantii 3937 0.61 DDA3937_RS04505 L-methionine/branched-chain amino acid transporter 0.62 DDA3937_RS09115 DUF3413 domain-containing protein low > 74
Dickeya dianthicola 67-19 0.58 HGI48_RS04465 L-methionine/branched-chain amino acid transporter 0.61 HGI48_RS09155 DUF3413 domain-containing protein low > 71
Dickeya dianthicola ME23 0.57 DZA65_RS04385 L-methionine/branched-chain amino acid transporter 0.61 DZA65_RS09455 DUF3413 domain-containing protein low > 75
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_18370 L-methionine/branched-chain amino acid transporter 0.39 CSW01_10200 DUF3413 domain-containing protein low > 62
Shewanella loihica PV-4 0.27 Shew_3597 inner membrane protein YjeH (RefSeq) 0.23 Shew_1470 sulfatase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.27 Sama_3458 inner membrane protein YjeH (RefSeq) 0.21 Sama_1555 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.23 Shewana3_3958 inner membrane protein YjeH (RefSeq) 0.24 Shewana3_2428 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.23 SO_4565 inner membrane protein YjeH (RefSeq) 0.25 SO2175 conserved hypothetical protein (NCBI ptt file) low > 76

Not shown: 2 genomes with orthologs for ECD_04011 only; 3 genomes with orthologs for ECD_02118 only