Conservation of cofitness between ECD_02276 and ECD_01824 in Escherichia coli BL21

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02276 D-serine dehydratase 1.0 ECD_01824 putative DNA-binding transcriptional regulator 0.72 15
Escherichia coli ECRC62 1.00 BNILDI_12985 dsdA D-serine ammonia-lyase 1.00 BNILDI_15635 hexR DNA-binding transcriptional regulator HexR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01355 D-serine dehydratase 1.00 OHPLBJKB_01875 HTH-type transcriptional regulator HexR low > 73
Escherichia coli BW25113 1.00 b2366 dsdA D-serine dehydratase (NCBI) 1.00 b1853 yebK predicted DNA-binding transcriptional regulator (NCBI) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_14130 dsdA D-serine ammonia-lyase 1.00 NOLOHH_16840 hexR DNA-binding transcriptional regulator HexR low > 75
Escherichia coli ECRC102 0.99 NIAGMN_20225 dsdA D-serine ammonia-lyase 1.00 NIAGMN_01735 hexR DNA-binding transcriptional regulator HexR — —
Escherichia coli ECRC101 0.99 MCAODC_12980 dsdA D-serine ammonia-lyase 1.00 MCAODC_19080 hexR DNA-binding transcriptional regulator HexR low > 87
Escherichia coli ECRC100 0.99 OKFHMN_22450 dsdA D-serine ammonia-lyase 1.00 OKFHMN_26325 hexR DNA-binding transcriptional regulator HexR low > 80
Escherichia coli ECRC98 0.99 JDDGAC_26410 dsdA D-serine ammonia-lyase 1.00 JDDGAC_00900 hexR DNA-binding transcriptional regulator HexR low > 86
Escherichia coli ECRC99 0.99 KEDOAH_05775 dsdA D-serine ammonia-lyase 1.00 KEDOAH_01780 hexR DNA-binding transcriptional regulator HexR — —
Escherichia fergusonii Becca 0.99 EFB2_04196 D-serine dehydratase 0.99 EFB2_02089 HTH-type transcriptional regulator HexR low > 86
Escherichia coli ECOR38 0.99 HEPCGN_21655 dsdA D-serine ammonia-lyase 1.00 HEPCGN_04730 hexR DNA-binding transcriptional regulator HexR low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS13620 D-serine ammonia-lyase 0.99 ECOLIN_RS10325 DNA-binding transcriptional regulator HexR low > 55
Klebsiella michiganensis M5al 0.87 BWI76_RS27860 D-serine dehydratase 0.90 BWI76_RS18110 transcriptional regulator HexR 0.15 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF293 D-serine dehydratase (EC 4.3.1.18) 0.93 GFF1632 Phosphogluconate repressor HexR, RpiR family low > 78
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3966 D-serine ammonia-lyase (EC 4.3.1.18) 0.91 EX28DRAFT_0703 transcriptional regulator, RpiR family low > 76
Enterobacter sp. TBS_079 0.81 MPMX20_00023 D-serine dehydratase 0.90 MPMX20_02758 HTH-type transcriptional regulator HexR low > 85
Vibrio cholerae E7946 ATCC 55056 0.71 CSW01_18510 D-serine dehydratase 0.72 CSW01_05825 transcriptional regulator HexR low > 62
Serratia liquefaciens MT49 0.69 IAI46_12905 D-serine ammonia-lyase 0.83 IAI46_14580 MurR/RpiR family transcriptional regulator low > 86
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS41275 D-serine ammonia-lyase 0.33 QEN71_RS26925 MurR/RpiR family transcriptional regulator low > 153
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_3648 D-serine ammonia-lyase (EC 4.3.1.18) (from data) 0.55 PfGW456L13_1900 Phosphogluconate repressor HexR, RpiR family low > 87
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_25210 D-serine ammonia-lyase (EC 4.3.1.18) (from data) 0.55 AO353_03365 transcriptional regulator low > 101
Dickeya dianthicola 67-19 0.58 HGI48_RS21080 D-serine ammonia-lyase 0.80 HGI48_RS10160 MurR/RpiR family transcriptional regulator low > 71
Dickeya dadantii 3937 0.57 DDA3937_RS00280 D-serine ammonia-lyase 0.81 DDA3937_RS10130 MurR/RpiR family transcriptional regulator low > 74
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_01568 D-serine ammonia-lyase 0.35 H281DRAFT_04279 transcriptional regulator, RpiR family low > 103
Castellaniella sp019104865 MT123 0.41 ABCV34_RS13655 D-serine ammonia-lyase 0.40 ABCV34_RS08655 SIS domain-containing protein low > 48
Cupriavidus basilensis FW507-4G11 0.40 RR42_RS28450 serine dehydratase 0.34 RR42_RS06120 transcriptional regulator low > 128
Acidovorax sp. GW101-3H11 0.37 Ac3H11_4130 D-serine dehydratase (EC 4.3.1.18) 0.35 Ac3H11_2055 Probable transcriptional regulator low > 79

Not shown: 1 genomes with orthologs for ECD_02276 only; 39 genomes with orthologs for ECD_01824 only