Conservation of cofitness between ECD_02179 and ECD_01802 in Escherichia coli BL21

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02179 uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent 1.0 ECD_01802 RNA chaperone, putative ProP translation regulator 0.77 12
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01458 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 1.00 OHPLBJKB_01900 RNA chaperone ProQ low > 74
Escherichia coli ECRC62 1.00 BNILDI_13535 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 BNILDI_15765 proQ RNA chaperone ProQ low > 75
Escherichia coli ECOR27 0.99 NOLOHH_14620 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 NOLOHH_16970 proQ RNA chaperone ProQ low > 76
Escherichia coli ECOR38 0.99 HEPCGN_22210 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 HEPCGN_04860 proQ RNA chaperone ProQ low > 88
Escherichia coli BW25113 0.99 b2253 arnB uridine 5'-(beta-1-threo-pentapyranosyl-4-ulose diphosphate) aminotransferase, PLP-dependent (RefSeq) 1.00 b1831 proQ putative solute/DNA competence effector (NCBI) low > 76
Escherichia coli Nissle 1917 0.97 ECOLIN_RS13125 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 ECOLIN_RS10195 RNA chaperone ProQ low > 55
Escherichia coli ECRC99 0.95 KEDOAH_05200 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 KEDOAH_01645 proQ RNA chaperone ProQ — —
Escherichia coli ECRC98 0.95 JDDGAC_26960 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 JDDGAC_01035 proQ RNA chaperone ProQ low > 87
Escherichia coli ECRC102 0.95 NIAGMN_20765 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 NIAGMN_01600 proQ RNA chaperone ProQ low > 80
Escherichia coli ECRC101 0.95 MCAODC_14035 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 MCAODC_18945 proQ RNA chaperone ProQ low > 88
Escherichia coli ECRC100 0.95 OKFHMN_22995 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 1.00 OKFHMN_26460 proQ RNA chaperone ProQ low > 79
Escherichia fergusonii Becca 0.95 EFB2_01603 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 1.00 EFB2_02170 RNA chaperone ProQ low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF1858 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase (EC 2.6.1.-) 0.84 GFF2846 ProQ: influences osmotic activation of compatible solute ProP low > 78
Enterobacter sp. TBS_079 0.81 MPMX20_04380 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.84 MPMX20_02738 RNA chaperone ProQ low > 85
Enterobacter asburiae PDN3 0.81 EX28DRAFT_4082 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 0.84 EX28DRAFT_0725 Activator of osmoprotectant transporter ProP low > 76
Klebsiella pneumoniae MKP103 0.80 KDGMDA_07345 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.76 KDGMDA_25250 RNA chaperone ProQ low > 95
Klebsiella michiganensis M5al 0.79 BWI76_RS26485 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 0.77 BWI76_RS17980 RNA chaperone ProQ low > 92
Erwinia tracheiphila HP pepo 2.2 0.78 IJEDHG_02605 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.65 IJEDHG_22320 proQ RNA chaperone ProQ — —
Erwinia tracheiphila SCR3 0.78 LU632_RS16495 arnB UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.66 LU632_RS13255 proQ RNA chaperone ProQ low > 74
Dickeya dadantii 3937 0.78 DDA3937_RS21390 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.67 DDA3937_RS11970 RNA chaperone ProQ low > 74
Dickeya dianthicola ME23 0.77 DZA65_RS22610 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.66 DZA65_RS12510 RNA chaperone ProQ — —
Erwinia amylovora T8 0.77 OLJFJH_17365 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.69 OLJFJH_13005 RNA chaperone ProQ — —
Dickeya dianthicola 67-19 0.77 HGI48_RS21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.66 HGI48_RS12060 RNA chaperone ProQ low > 71
Pectobacterium carotovorum WPP14 0.72 HER17_RS06520 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.61 HER17_RS11695 RNA chaperone ProQ low > 75
Pantoea sp. MT58 0.71 IAI47_21625 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.68 IAI47_08700 RNA chaperone ProQ low > 76
Serratia liquefaciens MT49 0.71 IAI46_11015 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.70 IAI46_10795 RNA chaperone ProQ low > 86
Pantoea agglomerans CFBP13505 P0401 0.71 PagCFBP13505_RS12240 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.69 PagCFBP13505_RS02530 RNA chaperone ProQ low > 74
Rahnella sp. WP5 0.70 EX31_RS14020 UDP-4-amino-4-deoxy-L-arabinose aminotransferase 0.66 EX31_RS24875 RNA chaperone ProQ low > 89
Shewanella sp. ANA-3 0.27 Shewana3_1303 polysaccharide biosynthesis protein (RefSeq) 0.33 Shewana3_1777 putative solute/DNA competence effector (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.25 MIT1002_01078 UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 0.35 MIT1002_02024 ProP effector low > 70
Shewanella loihica PV-4 0.25 Shew_1319 DegT/DnrJ/EryC1/StrS aminotransferase (RefSeq) 0.36 Shew_1801 putative solute/DNA competence effector (RefSeq) low > 60
Shewanella oneidensis MR-1 0.24 SO3270 polysaccharide biosynthesis protein (NCBI ptt file) 0.36 SO2602 hypothetical Activator of ProP osmoprotectant transporter (NCBI ptt file) low > 76

Not shown: 67 genomes with orthologs for ECD_02179 only; 2 genomes with orthologs for ECD_01802 only