Conservation of cofitness between ECD_03237 and ECD_01245 in Escherichia coli BL21

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03237 phosphoglycolate phosphatase 1.0 ECD_01245 23S rRNA pseudouridine(2605) synthase low > 61
Escherichia coli BW25113 1.00 b3385 gph phosphoglycolate phosphatase (NCBI) 1.00 b1269 rluB 23S rRNA pseudouridylate synthase (NCBI) low > 76
Escherichia coli ECRC100 0.99 OKFHMN_17135 gph phosphoglycolate phosphatase 0.99 OKFHMN_02630 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 80
Escherichia coli ECOR38 0.99 HEPCGN_15955 gph phosphoglycolate phosphatase 1.00 HEPCGN_25560 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 87
Escherichia coli ECRC99 0.99 KEDOAH_11005 gph phosphoglycolate phosphatase 0.99 KEDOAH_26135 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia coli ECRC62 0.99 BNILDI_02595 gph phosphoglycolate phosphatase 0.99 BNILDI_18445 rluB 23S rRNA pseudouridine(2605) synthase RluB 0.64 41
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00318 Phosphoglycolate phosphatase 1.00 OHPLBJKB_02415 Ribosomal large subunit pseudouridine synthase B 0.56 15
Escherichia coli ECRC102 0.99 NIAGMN_14905 gph phosphoglycolate phosphatase 0.99 NIAGMN_26800 rluB 23S rRNA pseudouridine(2605) synthase RluB — —
Escherichia fergusonii Becca 0.99 EFB2_00443 Phosphoglycolate phosphatase 1.00 EFB2_02658 Ribosomal large subunit pseudouridine synthase B low > 86
Escherichia coli ECRC98 0.99 JDDGAC_20765 gph phosphoglycolate phosphatase 0.99 JDDGAC_05175 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS19340 phosphoglycolate phosphatase 1.00 ECOLIN_RS07635 23S rRNA pseudouridine(2605) synthase RluB low > 55
Escherichia coli ECOR27 0.99 NOLOHH_08925 gph phosphoglycolate phosphatase 0.99 NOLOHH_20295 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 75
Escherichia coli ECRC101 0.99 MCAODC_07665 gph phosphoglycolate phosphatase 0.99 MCAODC_15635 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF634 Phosphoglycolate phosphatase (EC 3.1.3.18) 0.98 GFF2719 Ribosomal large subunit pseudouridine synthase B (EC 4.2.1.70) low > 78
Enterobacter asburiae PDN3 0.80 EX28DRAFT_4157 2-phosphoglycolate phosphatase, prokaryotic 0.91 EX28DRAFT_0940 pseudouridine synthase low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_04274 Phosphoglycolate phosphatase 0.95 MPMX20_02507 Ribosomal large subunit pseudouridine synthase B low > 85
Klebsiella michiganensis M5al 0.79 BWI76_RS26065 phosphoglycolate phosphatase 0.91 BWI76_RS11880 23S rRNA pseudouridylate synthase B low > 92
Dickeya dianthicola ME23 0.56 DZA65_RS20740 phosphoglycolate phosphatase 0.82 DZA65_RS10980 23S rRNA pseudouridine(2605) synthase RluB low > 75
Dickeya dadantii 3937 0.56 DDA3937_RS19525 phosphoglycolate phosphatase 0.82 DDA3937_RS10500 23S rRNA pseudouridine(2605) synthase RluB low > 74
Dickeya dianthicola 67-19 0.56 HGI48_RS19655 phosphoglycolate phosphatase 0.82 HGI48_RS10500 23S rRNA pseudouridine(2605) synthase RluB low > 71
Serratia liquefaciens MT49 0.55 IAI46_23680 phosphoglycolate phosphatase 0.86 IAI46_13995 23S rRNA pseudouridine(2605) synthase RluB low > 86
Pectobacterium carotovorum WPP14 0.55 HER17_RS01800 phosphoglycolate phosphatase 0.83 HER17_RS10900 23S rRNA pseudouridine(2605) synthase RluB low > 75
Pantoea sp. MT58 0.53 IAI47_01915 phosphoglycolate phosphatase 0.85 IAI47_09210 23S rRNA pseudouridine(2605) synthase RluB low > 76
Erwinia tracheiphila SCR3 0.51 LU632_RS22845 phosphoglycolate phosphatase 0.86 LU632_RS12730 rluB 23S rRNA pseudouridine(2605) synthase RluB low > 74
Shewanella loihica PV-4 0.37 Shew_0220 phosphoglycolate phosphatase (RefSeq) 0.65 Shew_2246 pseudouridine synthase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.37 Sama_3361 phosphoglycolate phosphatase (RefSeq) 0.64 Sama_2124 pseudouridine synthase, Rsu (RefSeq) low > 62
Shewanella sp. ANA-3 0.34 Shewana3_3887 phosphoglycolate phosphatase (RefSeq) 0.64 Shewana3_1525 ribosomal large subunit pseudouridine synthase B (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_13280 phosphoglycolate phosphatase 0.66 CSW01_05970 23S rRNA pseudouridylate synthase B — —
Alteromonas macleodii MIT1002 0.33 MIT1002_02231 Phosphoglycolate phosphatase 0.57 MIT1002_01435 Ribosomal large subunit pseudouridine synthase B low > 70
Marinobacter adhaerens HP15 0.28 HP15_3287 phosphoglycolate phosphatase 0.49 HP15_1530 RNA-binding S4 domain protein low > 73
Acinetobacter radioresistens SK82 0.26 MPMX26_00198 Phosphoglycolate phosphatase 0.50 MPMX26_02450 Ribosomal large subunit pseudouridine synthase B low > 36
Kangiella aquimarina DSM 16071 0.20 B158DRAFT_2318 2-phosphoglycolate phosphatase, prokaryotic 0.48 B158DRAFT_2311 ribosomal large subunit pseudouridine synthase B (EC 5.4.99.-) low > 40

Not shown: 56 genomes with orthologs for ECD_03237 only; 1 genomes with orthologs for ECD_01245 only