Conservation of cofitness between ECD_00884 and ECD_00204 in Escherichia coli BL21

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00884 macrolide ABC transporter peremase/ATPase 1.0 ECD_00204 putative membrane-bound lytic murein transglycosylase D 0.61 31
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02789 Macrolide export ATP-binding/permease protein MacB 0.90 OHPLBJKB_03450 Membrane-bound lytic murein transglycosylase D low > 73
Escherichia coli ECRC62 1.00 BNILDI_20455 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.90 BNILDI_09340 mltD murein transglycosylase D low > 75
Escherichia coli ECRC102 1.00 NIAGMN_03845 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.90 NIAGMN_07835 mltD murein transglycosylase D — —
Escherichia coli ECRC101 1.00 MCAODC_25020 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.90 MCAODC_00500 mltD murein transglycosylase D low > 87
Escherichia coli ECRC99 1.00 KEDOAH_22105 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.90 KEDOAH_18170 mltD murein transglycosylase D — —
Escherichia coli ECRC100 1.00 OKFHMN_05805 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.90 OKFHMN_09985 mltD murein transglycosylase D low > 80
Escherichia coli ECRC98 1.00 JDDGAC_09440 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.90 JDDGAC_13580 mltD murein transglycosylase D 0.67 13
Escherichia coli ECOR38 1.00 HEPCGN_22880 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.90 HEPCGN_07925 mltD murein transglycosylase D low > 87
Escherichia coli BW25113 1.00 b0879 macB fused macrolide transporter subunits of ABC superfamily: ATP-binding component/membrane component (NCBI) 1.00 b0211 mltD predicted membrane-bound lytic murein transglycosylase D (NCBI) low > 76
Escherichia coli ECOR27 0.99 NOLOHH_22200 macB macrolide ABC transporter ATP-binding protein/permease MacB 0.90 NOLOHH_02330 mltD murein transglycosylase D low > 75
Escherichia fergusonii Becca 0.99 EFB2_03182 Macrolide export ATP-binding/permease protein MacB 0.90 EFB2_03832 Membrane-bound lytic murein transglycosylase D low > 86
Enterobacter sp. TBS_079 0.86 MPMX20_01541 Macrolide export ATP-binding/permease protein MacB 0.88 MPMX20_00896 Membrane-bound lytic murein transglycosylase D low > 85
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2053 ABC-type antimicrobial peptide transport system, ATPase component 0.87 EX28DRAFT_2683 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF4904 Macrolide export ATP-binding/permease protein MacB (EC 3.6.3.-) 0.83 GFF4043 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) low > 78
Klebsiella michiganensis M5al 0.82 BWI76_RS09600 macrolide ABC transporter permease/ATP-binding protein MacB 0.86 BWI76_RS05435 murein transglycosylase D low > 92
Serratia liquefaciens MT49 0.72 IAI46_08500 macrolide ABC transporter ATP-binding protein/permease MacB 0.63 IAI46_04130 murein transglycosylase D low > 86
Variovorax sp. SCN45 0.61 GFF1293 Macrolide export ATP-binding/permease protein MacB 0.23 GFF1116 Membrane-bound lytic murein transglycosylase D 0.36 55
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_2618 ABC transporter:Protein of unknown function DUF214 0.34 Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N low > 86
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_2618 ABC transporter:Protein of unknown function DUF214 0.34 Psyr_1760 Peptidoglycan-binding LysM:SLT:MLTD_N low > 86
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS12500 MacB family efflux pump subunit 0.33 PFLU_RS12905 transglycosylase SLT domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.56 PFLU_RS12500 MacB family efflux pump subunit 0.33 PFLU_RS12905 transglycosylase SLT domain-containing protein low > 109
Pseudomonas sp. RS175 0.55 PFR28_02257 Macrolide export ATP-binding/permease protein MacB 0.34 PFR28_01551 Membrane-bound lytic murein transglycosylase D — —
Shewanella sp. ANA-3 0.55 Shewana3_3455 ABC transporter related (RefSeq) 0.29 Shewana3_2370 MltD domain-containing protein (RefSeq) — —
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_28200 macrolide transporter 0.34 AO356_24475 lytic transglycosylase low > 104
Pectobacterium carotovorum WPP14 0.54 HER17_RS17205 MacB family efflux pump subunit 0.64 HER17_RS05450 murein transglycosylase D low > 75
Shewanella oneidensis MR-1 0.54 SO0821 ABC transporter, ATP-binding/permease protein (NCBI ptt file) 0.29 SO2564 transglycosylase, Slt family (NCBI ptt file) low > 76
Dickeya dadantii 3937 0.51 DDA3937_RS04445 MacB family efflux pump subunit 0.64 DDA3937_RS16065 murein transglycosylase D low > 74
Dickeya dianthicola ME23 0.51 DZA65_RS04320 MacB family efflux pump subunit 0.63 DZA65_RS17270 murein transglycosylase D low > 75
Pseudomonas fluorescens FW300-N2E2 0.41 Pf6N2E2_19 Pyoverdine efflux carrier and ATP binding protein 0.34 Pf6N2E2_586 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) low > 103
Pseudomonas fluorescens GW456-L13 0.41 PfGW456L13_2392 Pyoverdine efflux carrier and ATP binding protein 0.34 PfGW456L13_3341 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) low > 87
Pseudomonas simiae WCS417 0.41 PS417_17640 macrolide ABC transporter ATP-binding protein 0.33 PS417_12215 lytic transglycosylase low > 88
Pseudomonas putida KT2440 0.40 PP_4210 pyoverdine efflux carrier and ATP binding protein 0.32 PP_4145 Membrane-bound lytic murein transglycosylase D low > 96
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_135 Pyoverdine efflux carrier and ATP binding protein 0.32 Pf1N1B4_4595 Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) — —
Alteromonas macleodii MIT1002 0.37 MIT1002_00482 Macrolide export ATP-binding/permease protein MacB 0.32 MIT1002_02495 Membrane-bound lytic murein transglycosylase D precursor low > 70

Not shown: 10 genomes with orthologs for ECD_00884 only; 17 genomes with orthologs for ECD_00204 only