Conservation of cofitness between ECD_03704 and ECD_00142 in Escherichia coli BL21

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03704 lysophospholipase L2 1.0 ECD_00142 poly(A) polymerase 0.51 7
Escherichia coli BW25113 1.00 b3825 pldB lysophospholipase L(2) (NCBI) 1.00 b0143 pcnB poly(A) polymerase I (VIMSS) low > 76
Escherichia coli ECOR27 1.00 NOLOHH_06475 pldB lysophospholipase L2 1.00 NOLOHH_02700 pcnB polynucleotide adenylyltransferase PcnB low > 75
Escherichia fergusonii Becca 1.00 EFB2_04812 Lysophospholipase L2 1.00 EFB2_03901 Poly(A) polymerase I low > 86
Escherichia coli ECRC62 1.00 BNILDI_05055 pldB lysophospholipase L2 1.00 BNILDI_08970 pcnB polynucleotide adenylyltransferase PcnB low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS21960 lysophospholipase L2 1.00 ECOLIN_RS00790 polynucleotide adenylyltransferase PcnB — —
Escherichia coli ECRC102 1.00 NIAGMN_12100 pldB lysophospholipase L2 1.00 NIAGMN_08205 pcnB polynucleotide adenylyltransferase PcnB — —
Escherichia coli ECRC100 1.00 OKFHMN_14345 pldB lysophospholipase L2 1.00 OKFHMN_10355 pcnB polynucleotide adenylyltransferase PcnB low > 80
Escherichia coli ECRC101 1.00 MCAODC_04850 pldB lysophospholipase L2 1.00 MCAODC_00870 pcnB polynucleotide adenylyltransferase PcnB low > 87
Escherichia coli ECRC98 1.00 JDDGAC_17970 pldB lysophospholipase L2 1.00 JDDGAC_13950 pcnB polynucleotide adenylyltransferase PcnB low > 86
Escherichia coli ECRC99 1.00 KEDOAH_13805 pldB lysophospholipase L2 1.00 KEDOAH_17800 pcnB polynucleotide adenylyltransferase PcnB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_04226 Lysophospholipase L2 1.00 OHPLBJKB_03519 Poly(A) polymerase I low > 73
Escherichia coli ECOR38 1.00 HEPCGN_13045 pldB lysophospholipase L2 1.00 HEPCGN_08305 pcnB polynucleotide adenylyltransferase PcnB low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF251 Lysophospholipase L2 (EC 3.1.1.5) 0.88 GFF89 Poly(A) polymerase (EC 2.7.7.19) low > 78
Enterobacter sp. TBS_079 0.83 MPMX20_04455 Lysophospholipase L2 0.85 MPMX20_00829 Poly(A) polymerase I low > 85
Enterobacter asburiae PDN3 0.82 EX28DRAFT_4490 Lysophospholipase 0.85 EX28DRAFT_3732 poly(A) polymerase low > 76
Klebsiella michiganensis M5al 0.80 BWI76_RS01260 lysophospholipase L2 0.83 BWI76_RS05005 polynucleotide adenylyltransferase low > 92
Serratia liquefaciens MT49 0.63 IAI46_00785 lysophospholipase L2 0.77 IAI46_21220 polynucleotide adenylyltransferase PcnB low > 86
Pantoea sp. MT58 0.62 IAI47_18340 lysophospholipase L2 0.78 IAI47_15645 polynucleotide adenylyltransferase PcnB low > 76
Erwinia tracheiphila SCR3 0.59 LU632_RS24080 pldB lysophospholipase L2 0.77 LU632_RS20090 pcnB polynucleotide adenylyltransferase PcnB low > 74
Dickeya dianthicola ME23 0.58 DZA65_RS21030 lysophospholipase L2 0.77 DZA65_RS17145 polynucleotide adenylyltransferase PcnB low > 75
Dickeya dadantii 3937 0.58 DDA3937_RS19830 lysophospholipase L2 0.77 DDA3937_RS15945 polynucleotide adenylyltransferase PcnB low > 74
Dickeya dianthicola 67-19 0.57 HGI48_RS19985 lysophospholipase L2 0.77 HGI48_RS16060 polynucleotide adenylyltransferase PcnB low > 71
Pectobacterium carotovorum WPP14 0.56 HER17_RS01410 lysophospholipase L2 0.75 HER17_RS05570 polynucleotide adenylyltransferase PcnB low > 75
Shewanella loihica PV-4 0.32 Shew_3723 alpha/beta hydrolase fold (RefSeq) 0.52 Shew_3131 poly(A) polymerase (RefSeq) low > 60
Shewanella sp. ANA-3 0.31 Shewana3_4119 alpha/beta hydrolase fold (RefSeq) 0.54 Shewana3_3406 poly(A) polymerase (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_00685 lysophospholipase 0.56 CSW01_03145 polynucleotide adenylyltransferase PcnB low > 62
Shewanella oneidensis MR-1 0.30 SO4733 lypA lysophospholipase L2 (NCBI ptt file) 0.54 SO0872 pcnB polyA polymerase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.27 Sama_0083 alpha/beta hydrolase fold (RefSeq) 0.52 Sama_0778 tRNA nucleotidyltransferase (CCA-adding enzyme) (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.27 MIT1002_00479 lysophospholipase L2 0.53 MIT1002_03692 Poly(A) polymerase I precursor low > 70

Not shown: 13 genomes with orthologs for ECD_03704 only; 30 genomes with orthologs for ECD_00142 only