Conservation of cofitness between DZA65_RS04530 and DZA65_RS10060 in Dickeya dianthicola ME23

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS04530 LysR family transcriptional regulator 1.0 DZA65_RS10060 ATP phosphoribosyltransferase 0.40 15
Dickeya dianthicola 67-19 0.99 HGI48_RS04610 LysR family transcriptional regulator 1.00 HGI48_RS09750 ATP phosphoribosyltransferase low > 71
Dickeya dadantii 3937 0.95 DDA3937_RS04650 LysR family transcriptional regulator 0.98 DDA3937_RS09740 ATP phosphoribosyltransferase low > 74
Pantoea sp. MT58 0.52 IAI47_17520 LysR family transcriptional regulator 0.91 IAI47_07095 ATP phosphoribosyltransferase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF4227 Putative LysR family transcriptional regulator 0.90 GFF3913 ATP phosphoribosyltransferase (EC 2.4.2.17) low > 78
Klebsiella michiganensis M5al 0.32 BWI76_RS10685 LysR family transcriptional regulator 0.88 BWI76_RS18920 ATP phosphoribosyltransferase low > 92
Lysobacter sp. OAE881 0.32 ABIE51_RS06090 LysR family transcriptional regulator 0.41 ABIE51_RS13330 ATP phosphoribosyltransferase low > 62
Serratia liquefaciens MT49 0.31 IAI46_21020 LysR family transcriptional regulator 0.94 IAI46_08215 ATP phosphoribosyltransferase low > 86
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS18110 LysR family transcriptional regulator 0.41 ABZR86_RS06735 ATP phosphoribosyltransferase low > 74
Escherichia coli ECRC102 0.30 NIAGMN_01435 dmlR DNA-binding transcriptional regulator DmlR 0.90 NIAGMN_22465 hisG ATP phosphoribosyltransferase — —
Escherichia coli ECRC62 0.30 BNILDI_15935 dmlR DNA-binding transcriptional regulator DmlR 0.91 BNILDI_14745 hisG ATP phosphoribosyltransferase low > 75
Escherichia coli ECOR27 0.30 NOLOHH_17150 dmlR DNA-binding transcriptional regulator DmlR 0.91 NOLOHH_15835 hisG ATP phosphoribosyltransferase — —
Escherichia coli ECRC98 0.30 JDDGAC_01205 dmlR DNA-binding transcriptional regulator DmlR 0.90 JDDGAC_28630 hisG ATP phosphoribosyltransferase — —
Escherichia coli ECRC101 0.30 MCAODC_18780 dmlR DNA-binding transcriptional regulator DmlR 0.90 MCAODC_20420 hisG ATP phosphoribosyltransferase low > 87
Escherichia coli ECRC100 0.30 OKFHMN_26630 dmlR DNA-binding transcriptional regulator DmlR 0.90 OKFHMN_24520 hisG ATP phosphoribosyltransferase low > 80
Escherichia coli BL21 0.30 ECD_01769 transcriptional activator of dmlA 0.90 ECD_01921 ATP phosphoribosyltransferase — —
Escherichia coli ECOR38 0.30 HEPCGN_05020 dmlR DNA-binding transcriptional regulator DmlR 0.90 HEPCGN_03225 hisG ATP phosphoribosyltransferase low > 87
Escherichia coli ECRC99 0.30 KEDOAH_01480 dmlR DNA-binding transcriptional regulator DmlR 0.90 KEDOAH_03630 hisG ATP phosphoribosyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.30 OHPLBJKB_01934 HTH-type transcriptional regulator DmlR 0.91 OHPLBJKB_01681 ATP phosphoribosyltransferase low > 73
Rahnella sp. WP5 0.30 EX31_RS18850 LysR family transcriptional regulator 0.93 EX31_RS11435 ATP phosphoribosyltransferase low > 89
Escherichia coli BW25113 0.30 b3060 ygiP predicted DNA-binding transcriptional regulator (NCBI) 0.91 b2019 hisG ATP phosphoribosyltransferase (NCBI) low > 76
Escherichia fergusonii Becca 0.30 EFB2_00751 HTH-type transcriptional regulator DmlR 0.91 EFB2_01837 ATP phosphoribosyltransferase low > 86
Escherichia coli Nissle 1917 0.30 ECOLIN_RS17670 L-tartrate utilization transcriptional activator TtdR 0.91 ECOLIN_RS11940 ATP phosphoribosyltransferase — —
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_19070 LysR family transcriptional regulator 0.70 CSW01_05745 ATP phosphoribosyltransferase low > 62
Enterobacter sp. TBS_079 0.29 MPMX20_03495 HTH-type transcriptional regulator DmlR 0.90 MPMX20_03001 ATP phosphoribosyltransferase low > 85
Enterobacter asburiae PDN3 0.28 EX28DRAFT_1614 Transcriptional regulator 0.90 EX28DRAFT_0540 ATP phosphoribosyltransferase low > 76
Pectobacterium carotovorum WPP14 0.25 HER17_RS18920 LysR family transcriptional regulator 0.96 HER17_RS12225 ATP phosphoribosyltransferase low > 75
Shewanella amazonensis SB2B 0.24 Sama_3218 LysR family transcriptional regulator (RefSeq) 0.65 Sama_1941 hisG ATP phosphoribosyltransferase (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.24 MIT1002_01798 D-malate degradation protein R 0.65 MIT1002_02632 ATP phosphoribosyltransferase low > 70

Not shown: 30 genomes with orthologs for DZA65_RS04530 only; 27 genomes with orthologs for DZA65_RS10060 only