Conservation of cofitness between DDA3937_RS15930 and DDA3937_RS01945 in Dickeya dadantii 3937

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dadantii 3937 1.0 DDA3937_RS15930 DNA/RNA nuclease SfsA 1.0 DDA3937_RS01945 ribonuclease E inhibitor RraB 0.60 14
Dickeya dianthicola 67-19 0.97 HGI48_RS16045 DNA/RNA nuclease SfsA 0.73 HGI48_RS01920 ribonuclease E inhibitor RraB low > 71
Dickeya dianthicola ME23 0.97 DZA65_RS17130 DNA/RNA nuclease SfsA 0.73 DZA65_RS01990 ribonuclease E inhibitor RraB low > 75
Pectobacterium carotovorum WPP14 0.70 HER17_RS05585 DNA/RNA nuclease SfsA 0.69 HER17_RS19495 ribonuclease E inhibitor RraB 0.53 59
Rahnella sp. WP5 0.68 EX31_RS03245 DNA/RNA nuclease SfsA 0.62 EX31_RS12830 ribonuclease E inhibitor RraB low > 89
Serratia liquefaciens MT49 0.68 IAI46_21205 DNA/RNA nuclease SfsA 0.66 IAI46_02325 ribonuclease E inhibitor RraB low > 86
Enterobacter sp. TBS_079 0.67 MPMX20_00832 Sugar fermentation stimulation protein A 0.57 MPMX20_00557 Regulator of ribonuclease activity B low > 85
Escherichia coli BW25113 0.66 b0146 sfsA sugar fermentation stimulation protein A (NCBI) 0.66 b4255 yjgD hypothetical protein (NCBI) low > 76
Escherichia coli BL21 0.66 ECD_00145 sugar fermentation stimulation protein A 0.66 ECD_04121 protein inhibitor of RNase E low > 61
Escherichia coli ECRC100 0.66 OKFHMN_10340 sfsA DNA/RNA nuclease SfsA 0.66 OKFHMN_11830 rraB ribonuclease E inhibitor RraB low > 80
Escherichia coli ECRC62 0.66 BNILDI_08985 sfsA DNA/RNA nuclease SfsA 0.66 BNILDI_07430 rraB ribonuclease E inhibitor RraB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.66 OHPLBJKB_03516 Sugar fermentation stimulation protein A 0.66 OHPLBJKB_03781 Regulator of ribonuclease activity B low > 73
Escherichia coli ECRC101 0.66 MCAODC_00855 sfsA DNA/RNA nuclease SfsA 0.66 MCAODC_02335 rraB ribonuclease E inhibitor RraB low > 87
Escherichia coli ECRC99 0.66 KEDOAH_17815 sfsA DNA/RNA nuclease SfsA 0.66 KEDOAH_16325 rraB ribonuclease E inhibitor RraB — —
Escherichia coli ECOR27 0.66 NOLOHH_02685 sfsA DNA/RNA nuclease SfsA 0.66 NOLOHH_04085 rraB ribonuclease E inhibitor RraB low > 75
Escherichia coli ECRC98 0.66 JDDGAC_13935 sfsA DNA/RNA nuclease SfsA 0.66 JDDGAC_15470 rraB ribonuclease E inhibitor RraB low > 86
Escherichia coli ECRC102 0.66 NIAGMN_08190 sfsA DNA/RNA nuclease SfsA 0.66 NIAGMN_09680 rraB ribonuclease E inhibitor RraB — —
Escherichia coli ECOR38 0.66 HEPCGN_08290 sfsA DNA/RNA nuclease SfsA 0.66 HEPCGN_10020 rraB ribonuclease E inhibitor RraB low > 87
Klebsiella michiganensis M5al 0.66 BWI76_RS05020 sugar fermentation stimulation protein SfsA 0.60 BWI76_RS03015 RNase E inhibitor protein low > 92
Escherichia coli Nissle 1917 0.65 ECOLIN_RS00820 DNA/RNA nuclease SfsA 0.63 ECOLIN_RS24670 ribonuclease E inhibitor RraB — —
Enterobacter asburiae PDN3 0.65 EX28DRAFT_3735 sugar fermentation stimulation protein 0.57 EX28DRAFT_3462 Uncharacterized protein conserved in bacteria low > 76
Escherichia fergusonii Becca 0.65 EFB2_03898 Sugar fermentation stimulation protein A 0.66 EFB2_04280 Regulator of ribonuclease activity B low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF86 Sugar/maltose fermentation stimulation protein homolog 0.61 GFF941 Ribonuclease E inhibitor RraB low > 78
Erwinia tracheiphila SCR3 0.64 LU632_RS20075 sfsA DNA/RNA nuclease SfsA 0.69 LU632_RS20905 rraB ribonuclease E inhibitor RraB low > 74
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_03160 DNA/RNA nuclease SfsA 0.50 CSW01_02230 ribonuclease E inhibitor RraB low > 62
Shewanella loihica PV-4 0.57 Shew_3128 sugar fermentation stimulation protein (RefSeq) 0.48 Shew_0451 hypothetical protein (RefSeq) low > 60
Shewanella oneidensis MR-1 0.54 SO0875 sfsA sugar fermentation stimulation protein (NCBI ptt file) 0.49 SO0568 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.54 Shewana3_3403 sugar fermentation stimulation protein A (RefSeq) 0.49 Shewana3_0569 hypothetical protein (RefSeq) — —
Shewanella amazonensis SB2B 0.54 Sama_0781 sugar fermentation stimulation protein A (RefSeq) 0.52 Sama_3138 hypothetical protein (RefSeq) low > 62

Not shown: 31 genomes with orthologs for DDA3937_RS15930 only; 0 genomes with orthologs for DDA3937_RS01945 only