Conservation of cofitness between CSW01_01875 and CSW01_13285 in Vibrio cholerae E7946 ATCC 55056

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01875 hypothetical protein 1.0 CSW01_13285 ribulose-phosphate 3-epimerase 0.85 7
Rahnella sp. WP5 0.66 EX31_RS04470 transcriptional regulator 0.74 EX31_RS04705 ribulose-phosphate 3-epimerase — —
Dickeya dianthicola 67-19 0.66 HGI48_RS19440 transcriptional regulator 0.76 HGI48_RS19660 ribulose-phosphate 3-epimerase — —
Serratia liquefaciens MT49 0.66 IAI46_23490 transcriptional regulator 0.76 IAI46_23685 ribulose-phosphate 3-epimerase low > 87
Dickeya dianthicola ME23 0.66 DZA65_RS20560 transcriptional regulator 0.76 DZA65_RS20745 ribulose-phosphate 3-epimerase — —
Dickeya dadantii 3937 0.66 DDA3937_RS19340 transcriptional regulator 0.75 DDA3937_RS19530 ribulose-phosphate 3-epimerase — —
Erwinia tracheiphila SCR3 0.66 LU632_RS22710 transcriptional regulator 0.76 LU632_RS22850 rpe ribulose-phosphate 3-epimerase — —
Erwinia tracheiphila HP pepo 2.2 0.66 IJEDHG_12210 Uncharacterized protein YheO 0.76 IJEDHG_12050 rpe ribulose-phosphate 3-epimerase — —
Erwinia amylovora T8 0.66 OLJFJH_03930 Uncharacterized protein YheO 0.76 OLJFJH_04075 ribulose-phosphate 3-epimerase — —
Pectobacterium carotovorum WPP14 0.65 HER17_RS02010 transcriptional regulator 0.76 HER17_RS01795 ribulose-phosphate 3-epimerase low > 75
Pantoea sp. MT58 0.65 IAI47_02055 transcriptional regulator 0.76 IAI47_01910 ribulose-phosphate 3-epimerase — —
Pantoea agglomerans CFBP13505 P0401 0.65 PagCFBP13516_RS02070 helix-turn-helix transcriptional regulator 0.76 PagCFBP13516_RS01910 rpe ribulose-phosphate 3-epimerase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF3726 YheO-like PAS domain 0.76 GFF633 Ribulose-phosphate 3-epimerase (EC 5.1.3.1) low > 78
Escherichia coli ECOR38 0.64 HEPCGN_16130 yheO Uncharacterized protein YheO 0.77 HEPCGN_15950 rpe ribulose-phosphate 3-epimerase low > 88
Escherichia coli ECRC100 0.64 OKFHMN_17300 yheO Uncharacterized protein YheO 0.77 OKFHMN_17130 dam adenine-specific DNA-methyltransferase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_00357 Transcriptional regulator DauR 0.77 OHPLBJKB_00317 Ribulose-phosphate 3-epimerase — —
Klebsiella pneumoniae MRSN742743 0.64 GJGHJB_00384 yheO Uncharacterized protein YheO 0.78 GJGHJB_00357 rpe ribulose-phosphate 3-epimerase — —
Escherichia coli ECRC101 0.64 MCAODC_07830 yheO Uncharacterized protein YheO 0.77 MCAODC_07660 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC98 0.64 JDDGAC_20930 yheO Uncharacterized protein YheO 0.77 JDDGAC_20760 dam adenine-specific DNA-methyltransferase — —
Escherichia coli BW25113 0.64 b3346 yheO orf, hypothetical protein (VIMSS) 0.77 b3386 rpe ribulose-phosphate 3-epimerase (NCBI) low > 76
Escherichia fergusonii Becca 0.64 EFB2_00477 Transcriptional regulator DauR 0.77 EFB2_00442 Ribulose-phosphate 3-epimerase — —
Escherichia coli ECRC62 0.64 BNILDI_02420 yheO Uncharacterized protein YheO 0.77 BNILDI_02600 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECOR27 0.64 NOLOHH_09100 yheO Uncharacterized protein YheO 0.77 NOLOHH_08920 dam adenine-specific DNA-methyltransferase — —
Escherichia coli ECRC102 0.64 NIAGMN_15070 yheO Uncharacterized protein YheO 0.77 NIAGMN_14900 dam adenine-specific DNA-methyltransferase — —
Klebsiella pneumoniae MKP103 0.64 KDGMDA_06760 Uncharacterized protein YheO 0.78 KDGMDA_06895 ribulose-phosphate 3-epimerase — —
Escherichia coli BL21 0.64 ECD_03197 putative PAS domain-containing DNA-binding transcriptional regulator 0.77 ECD_03238 D-ribulose-5-phosphate 3-epimerase low > 61
Escherichia coli Nissle 1917 0.64 ECOLIN_RS19165 transcriptional regulator 0.77 ECOLIN_RS19345 ribulose-phosphate 3-epimerase low > 55
Escherichia coli ECRC99 0.64 KEDOAH_10840 yheO Uncharacterized protein YheO 0.77 KEDOAH_11010 dam adenine-specific DNA-methyltransferase — —
Klebsiella michiganensis M5al 0.64 BWI76_RS25905 hypothetical protein 0.77 BWI76_RS26070 ribulose-phosphate 3-epimerase — —
Enterobacter sp. TBS_079 0.64 MPMX20_04239 Transcriptional regulator DauR 0.77 MPMX20_04275 Ribulose-phosphate 3-epimerase low > 85
Enterobacter asburiae PDN3 0.64 EX28DRAFT_4184 Uncharacterized protein conserved in bacteria 0.78 EX28DRAFT_4156 ribulose-phosphate 3-epimerase low > 76
Shewanella oneidensis MR-1 0.35 SO1402 conserved hypothetical protein (NCBI ptt file) 0.78 SO0292 rpe ribulose-phosphate 3-epimerase (NCBI ptt file) — —
Shewanella sp. ANA-3 0.35 Shewana3_2973 YheO domain-containing protein (RefSeq) 0.78 Shewana3_3888 ribulose-5-phosphate 3-epimerase (RefSeq) — —

Not shown: 0 genomes with orthologs for CSW01_01875 only; 92 genomes with orthologs for CSW01_13285 only