Conservation of cofitness between CSW01_16805 and CSW01_11725 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_16805 anaerobic ribonucleoside-triphosphate reductase activating protein 1.0 CSW01_11725 hypothetical protein 0.48 17
Serratia liquefaciens MT49 0.77 IAI46_02130 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.14 IAI46_10580 nucleoside-specific channel-forming protein Tsx low > 87
Klebsiella michiganensis M5al 0.74 BWI76_RS02930 anaerobic ribonucleoside-triphosphate reductase activating protein 0.14 BWI76_RS06335 nucleoside-specific channel-forming protein Tsx low > 92
Klebsiella pneumoniae MKP103 0.72 KDGMDA_11400 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.15 KDGMDA_14425 Nucleoside-specific channel-forming protein Tsx low > 95
Pectobacterium carotovorum WPP14 0.72 HER17_RS19530 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.14 HER17_RS03255 nucleoside-specific channel-forming protein Tsx low > 75
Shewanella sp. ANA-3 0.72 Shewana3_2602 nrdG anaerobic ribonucleotide reductase-activating protein (RefSeq) 0.55 Shewana3_1040 nucleoside-specific channel-forming protein, Tsx (RefSeq) low > 73
Escherichia coli BW25113 0.72 b4237 nrdG anaerobic ribonucleotide reductase activating protein (NCBI) 0.12 b0411 tsx nucleoside channel, receptor of phage T6 and colicin K (NCBI) low > 76
Escherichia coli ECRC102 0.72 NIAGMN_09765 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.12 NIAGMN_06525 tsx nucleoside-specific channel-forming protein Tsx low > 80
Escherichia coli ECRC101 0.72 MCAODC_02420 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.12 MCAODC_27695 tsx nucleoside-specific channel-forming protein Tsx low > 87
Escherichia coli ECRC62 0.72 BNILDI_07335 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.12 BNILDI_22830 tsx nucleoside-specific channel-forming protein Tsx low > 75
Escherichia coli ECOR27 0.72 NOLOHH_04175 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.12 NOLOHH_01415 tsx nucleoside-specific channel-forming protein Tsx low > 76
Escherichia coli ECRC100 0.72 OKFHMN_11915 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.12 OKFHMN_08470 tsx nucleoside-specific channel-forming protein Tsx low > 79
Rahnella sp. WP5 0.72 EX31_RS08400 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.15 EX31_RS18780 nucleoside-specific channel-forming protein Tsx low > 89
Escherichia coli Nissle 1917 0.72 ECOLIN_RS24580 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.13 ECOLIN_RS22735 nucleoside-specific channel-forming protein Tsx low > 55
Escherichia coli ECRC98 0.72 JDDGAC_15555 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.12 JDDGAC_12125 tsx nucleoside-specific channel-forming protein Tsx low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF918 Ribonucleotide reductase of class III (anaerobic), activating protein (EC 1.97.1.4) 0.15 GFF4313 Nucleoside-specific channel-forming protein Tsx precursor low > 78
Escherichia coli ECOR38 0.72 HEPCGN_10110 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.13 HEPCGN_12335 nucleoside-specific channel-forming protein Tsx low > 88
Escherichia coli ECRC99 0.72 KEDOAH_16240 nrdG anaerobic ribonucleoside-triphosphate reductase-activating protein 0.12 KEDOAH_19495 tsx nucleoside-specific channel-forming protein Tsx — —
Escherichia fergusonii Becca 0.72 EFB2_04296 Anaerobic ribonucleoside-triphosphate reductase-activating protein 0.13 EFB2_04677 Nucleoside-specific channel-forming protein Tsx 0.75 51
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_03798 Anaerobic ribonucleoside-triphosphate reductase-activating protein 0.12 OHPLBJKB_03265 Nucleoside-specific channel-forming protein Tsx low > 74
Shewanella oneidensis MR-1 0.71 SO2833 nrdG anaerobic ribonucleoside-triphosphate reductase activating protein (NCBI ptt file) 0.50 SO1215 outer membrane protein OmpK, putative (NCBI ptt file) low > 76
Escherichia coli BL21 0.71 ECD_04105 anaerobic ribonucleotide reductase activating protein 0.12 ECD_00359 nucleoside channel, receptor of phage T6 and colicin K low > 61
Shewanella loihica PV-4 0.70 Shew_2448 nrdG anaerobic ribonucleotide reductase-activating protein (RefSeq) 0.53 Shew_2816 nucleoside-specific channel-forming protein, Tsx (RefSeq) — —
Enterobacter asburiae PDN3 0.70 EX28DRAFT_3436 anaerobic ribonucleoside-triphosphate reductase activating protein 0.12 EX28DRAFT_2559 Nucleoside-binding outer membrane protein low > 76
Dickeya dadantii 3937 0.70 DDA3937_RS01870 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.13 DDA3937_RS17950 nucleoside-specific channel-forming protein Tsx low > 74
Dickeya dianthicola 67-19 0.69 HGI48_RS01820 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.12 HGI48_RS17885 nucleoside-specific channel-forming protein Tsx low > 71
Enterobacter sp. TBS_079 0.69 MPMX20_00530 Anaerobic ribonucleoside-triphosphate reductase-activating protein 0.12 MPMX20_01003 Nucleoside-specific channel-forming protein Tsx low > 85
Dickeya dianthicola ME23 0.69 DZA65_RS01875 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.12 DZA65_RS19030 nucleoside-specific channel-forming protein Tsx low > 75
Pantoea sp. MT58 0.68 IAI47_16930 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.14 IAI47_17615 nucleoside-specific channel-forming protein Tsx low > 76
Pantoea agglomerans CFBP13505 P0401 0.66 PagCFBP13505_RS09025 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.14 PagCFBP13505_RS09710 nucleoside-specific channel-forming protein Tsx low > 74
Erwinia amylovora T8 0.64 OLJFJH_07300 anaerobic ribonucleoside-triphosphate reductase-activating protein 0.14 OLJFJH_09875 nucleoside-specific channel-forming protein Tsx low > 58

Not shown: 8 genomes with orthologs for CSW01_16805 only; 4 genomes with orthologs for CSW01_11725 only