Conservation of cofitness between CSW01_01380 and CSW01_11710 in Vibrio cholerae E7946 ATCC 55056
13 genomes with putative orthologs of both genes
| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_01380 | | D-2-hydroxyacid dehydrogenase | 1.0 | CSW01_11710 | | transcriptional regulator | 0.70 | 14 |
| Shewanella sp. ANA-3 | 0.40 | Shewana3_0583 | | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) | 0.26 | Shewana3_2466 | | anti-ECFsigma factor, ChrR (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.39 | Sama_3039 | | Phosphoglycerate dehydrogenase (EC 1.1.1.95) (from data) | 0.24 | Sama_2037 | | anti-ECFsigma factor, ChrR (RefSeq) | low | > 62 |
| Shewanella loihica PV-4 | 0.39 | Shew_0553 | | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding (RefSeq) | 0.26 | Shew_1477 | | anti-ECFsigma factor, ChrR (RefSeq) | low | > 60 |
| Shewanella oneidensis MR-1 | 0.38 | SO0585 | | D-isomer specific 2-hydroxyacid dehydrogenase family protein (NCBI ptt file) | 0.30 | SO1985 | | transcriptional activator, putative (NCBI ptt file) | low | > 76 |
| Alteromonas macleodii MIT1002 | 0.29 | MIT1002_03160 | | Glyoxylate/hydroxypyruvate reductase A | 0.27 | MIT1002_02681 | | Transcriptional activator ChrR | low | > 70 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.25 | Psyr_1565 | | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein | 0.19 | Psyr_0891 | | anti-ECFsigma factor, ChrR | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.25 | Psyr_1565 | | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding protein | 0.19 | Psyr_0891 | | anti-ECFsigma factor, ChrR | low | > 86 |
| Variovorax sp. OAS795 | 0.20 | ABID97_RS25925 | | glyoxylate/hydroxypyruvate reductase A | 0.19 | ABID97_RS21870 | | ChrR family anti-sigma-E factor | — | — |
| Azospirillum sp. SherDot2 | 0.19 | MPMX19_00078 | | Glyoxylate/hydroxypyruvate reductase A | 0.21 | MPMX19_02021 | | Anti-sigma-E factor ChrR | low | > 112 |
| Azospirillum brasilense Sp245 | 0.18 | AZOBR_RS03790 | | D-2-hydroxyacid dehydrogenase | 0.21 | AZOBR_RS00815 | | putative transcriptional activator | low | > 97 |
| Phaeobacter inhibens DSM 17395 | 0.17 | PGA1_c26570 | | putative glyoxylate/hydroxypyruvate reductase A | 0.20 | PGA1_c27500 | | transcriptional activator ChrR | low | > 62 |
| Dinoroseobacter shibae DFL-12 | 0.16 | Dshi_0590 | | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding (RefSeq) | 0.21 | Dshi_0365 | | anti-ECFsigma factor, ChrR (RefSeq) | low | > 64 |
| Rhizobium sp. OAE497 | 0.16 | ABIE40_RS00635 | | glyoxylate/hydroxypyruvate reductase A | 0.20 | ABIE40_RS08290 | | ChrR family anti-sigma-E factor | low | > 107 |
Not shown: 47 genomes with orthologs for CSW01_01380 only; 11 genomes with orthologs for CSW01_11710 only