Conservation of cofitness between CSW01_00385 and CSW01_11330 in Vibrio cholerae E7946 ATCC 55056

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00385 transcriptional regulator AsnC 1.0 CSW01_11330 DNA endonuclease SmrA 0.44 19
Rahnella sp. WP5 0.73 EX31_RS06150 transcriptional regulator AsnC 0.32 EX31_RS07180 DNA endonuclease SmrA low > 89
Dickeya dianthicola ME23 0.72 DZA65_RS22350 transcriptional regulator AsnC 0.28 DZA65_RS12625 DNA endonuclease SmrA low > 75
Shewanella oneidensis MR-1 0.72 SO3799 asnC regulatory protein AsnC (NCBI ptt file) 0.31 SO2495 Smr domain protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.72 Shewana3_0798 DNA-binding transcriptional regulator AsnC (RefSeq) 0.33 Shewana3_2157 Smr protein/MutS2 (RefSeq) low > 73
Shewanella loihica PV-4 0.71 Shew_0782 DNA-binding transcriptional regulator AsnC (RefSeq) 0.26 Shew_2054 Smr protein/MutS2 (RefSeq) low > 60
Pantoea sp. MT58 0.71 IAI47_00310 transcriptional regulator AsnC 0.28 IAI47_09585 DNA endonuclease SmrA low > 76
Shewanella amazonensis SB2B 0.70 Sama_0605 DNA-binding transcriptional regulator AsnC (RefSeq) 0.26 Sama_1818 Smr domain-containing protein (RefSeq) low > 62
Serratia liquefaciens MT49 0.70 IAI46_25100 transcriptional regulator AsnC 0.31 IAI46_19830 DNA endonuclease SmrA low > 86
Klebsiella michiganensis M5al 0.68 BWI76_RS00245 transcriptional regulator AsnC 0.28 BWI76_RS16155 hypothetical protein — —
Escherichia coli BL21 0.68 ECD_03627 transcriptional activator of asnA; autorepressor 0.31 ECD_01317 DNA endonuclease low > 61
Escherichia coli ECRC102 0.68 NIAGMN_12530 asnC transcriptional regulator AsnC 0.31 NIAGMN_26360 smrA DNA endonuclease SmrA — —
Escherichia coli ECRC99 0.68 KEDOAH_13375 asnC transcriptional regulator AsnC 0.31 KEDOAH_26565 smrA DNA endonuclease SmrA — —
Escherichia coli Nissle 1917 0.68 ECOLIN_RS21525 transcriptional regulator AsnC 0.32 ECOLIN_RS08040 DNA endonuclease SmrA low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.68 OHPLBJKB_04310 Regulatory protein AsnC 0.31 OHPLBJKB_02342 putative DNA endonuclease SmrA low > 73
Escherichia coli ECRC100 0.68 OKFHMN_14775 asnC transcriptional regulator AsnC 0.31 OKFHMN_02190 smrA DNA endonuclease SmrA low > 80
Escherichia coli ECOR27 0.68 NOLOHH_06910 asnC transcriptional regulator AsnC 0.31 NOLOHH_19905 smrA DNA endonuclease SmrA low > 75
Escherichia coli BW25113 0.68 b3743 asnC DNA-binding transcriptional dual regulator (NCBI) 0.31 b1340 ydaL hypothetical protein (NCBI) — —
Escherichia coli ECRC98 0.68 JDDGAC_18395 asnC transcriptional regulator AsnC 0.31 JDDGAC_04750 smrA DNA endonuclease SmrA low > 86
Escherichia fergusonii Becca 0.68 EFB2_04890 Regulatory protein AsnC 0.31 EFB2_02588 putative DNA endonuclease SmrA low > 86
Escherichia coli ECOR38 0.68 HEPCGN_13490 asnC transcriptional regulator AsnC 0.32 HEPCGN_25970 smrA DNA endonuclease SmrA low > 87
Escherichia coli ECRC101 0.68 MCAODC_05280 asnC transcriptional regulator AsnC 0.31 MCAODC_16065 smrA DNA endonuclease SmrA low > 87
Escherichia coli ECRC62 0.68 BNILDI_04615 asnC transcriptional regulator AsnC 0.31 BNILDI_18055 smrA DNA endonuclease SmrA low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.67 GFF1714 Regulatory protein AsnC 0.28 GFF2654 FIG00638524: hypothetical protein low > 78
Kangiella aquimarina DSM 16071 0.59 B158DRAFT_1998 Transcriptional regulators 0.49 B158DRAFT_1926 Uncharacterized protein conserved in bacteria low > 40
Rhodanobacter sp000427505 FW510-R12 0.23 LRK53_RS03530 Lrp/AsnC family transcriptional regulator 0.16 LRK53_RS12275 Smr/MutS family protein — —

Not shown: 24 genomes with orthologs for CSW01_00385 only; 27 genomes with orthologs for CSW01_11330 only