Conservation of cofitness between CSW01_12480 and CSW01_10710 in Vibrio cholerae E7946 ATCC 55056

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12480 sigma-E factor negative regulatory protein RseA 1.0 CSW01_10710 deferrochelatase 0.46 14
Klebsiella pneumoniae MKP103 0.36 KDGMDA_28475 anti-sigma-E factor RseA 0.40 KDGMDA_27550 peroxidase low > 95
Klebsiella michiganensis M5al 0.35 BWI76_RS21350 anti-RNA polymerase sigma factor SigE 0.40 BWI76_RS20710 dyp-type peroxidase family protein low > 92
Escherichia coli ECRC102 0.35 NIAGMN_19150 rseA anti-sigma-E factor RseA 0.40 NIAGMN_19890 yfeX porphyrinogen peroxidase low > 80
Escherichia coli ECRC98 0.35 JDDGAC_25045 rseA anti-sigma-E factor RseA 0.40 JDDGAC_26070 yfeX porphyrinogen peroxidase low > 87
Escherichia coli ECRC101 0.35 MCAODC_11910 rseA anti-sigma-E factor RseA 0.40 MCAODC_12650 yfeX porphyrinogen peroxidase low > 87
Escherichia coli ECRC100 0.35 OKFHMN_21380 rseA anti-sigma-E factor RseA 0.40 OKFHMN_22120 yfeX porphyrinogen peroxidase — —
Escherichia coli ECRC99 0.35 KEDOAH_06840 rseA anti-sigma-E factor RseA 0.40 KEDOAH_06100 yfeX porphyrinogen peroxidase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF2108 Sigma factor RpoE negative regulatory protein RseA 0.39 GFF2061 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup — —
Rahnella sp. WP5 0.33 EX31_RS21805 anti-sigma-E factor RseA 0.42 EX31_RS20230 Dyp-type peroxidase low > 89
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_01135 Anti-sigma-E factor RseA 0.40 OHPLBJKB_01291 putative deferrochelatase/peroxidase YfeX low > 74
Enterobacter asburiae PDN3 0.33 EX28DRAFT_0073 Negative regulator of sigma E activity 0.39 EX28DRAFT_0204 Dyp-type peroxidase family low > 76
Pectobacterium carotovorum WPP14 0.32 HER17_RS05785 anti-sigma-E factor RseA 0.40 HER17_RS17230 Dyp-type peroxidase — —
Escherichia coli Nissle 1917 0.32 ECOLIN_RS14555 anti-sigma-E factor RseA 0.40 ECOLIN_RS13940 porphyrinogen peroxidase low > 55
Escherichia coli ECOR38 0.32 HEPCGN_20525 rseA anti-sigma-E factor RseA 0.40 HEPCGN_21295 yfeX porphyrinogen peroxidase low > 88
Escherichia coli ECOR27 0.32 NOLOHH_13055 rseA anti-sigma-E factor RseA 0.40 NOLOHH_13800 yfeX porphyrinogen peroxidase low > 76
Escherichia fergusonii Becca 0.32 EFB2_01324 Anti-sigma-E factor RseA 0.40 EFB2_01448 Dye-decolorizing peroxidase YfeX low > 86
Escherichia coli ECRC62 0.32 BNILDI_11855 rseA anti-sigma-E factor RseA 0.40 BNILDI_12665 yfeX porphyrinogen peroxidase low > 75
Escherichia coli BW25113 0.32 b2572 rseA anti-sigma factor (NCBI) 0.40 b2431 b2431 orf, hypothetical protein (VIMSS) low > 76
Escherichia coli BL21 0.32 ECD_02466 anti-sigma factor 0.40 ECD_02331 porphyrinogen oxidase, cytoplasmic — —
Enterobacter sp. TBS_079 0.32 MPMX20_03443 Anti-sigma-E factor RseA 0.40 MPMX20_03318 Dye-decolorizing peroxidase YfeX low > 85
Dickeya dianthicola 67-19 0.31 HGI48_RS15845 anti-sigma-E factor RseA 0.41 HGI48_RS04395 Dyp-type peroxidase — —
Dickeya dianthicola ME23 0.31 DZA65_RS16925 anti-sigma-E factor RseA 0.41 DZA65_RS04310 Dyp-type peroxidase low > 75
Dickeya dadantii 3937 0.30 DDA3937_RS15760 anti-sigma-E factor RseA 0.41 DDA3937_RS04420 Dyp-type peroxidase — —
Serratia liquefaciens MT49 0.29 IAI46_19580 anti-sigma-E factor RseA 0.43 IAI46_18515 Dyp-type peroxidase low > 87
Shewanella oneidensis MR-1 0.27 SO1343 rseA sigma-E factor negative regulatory protein (NCBI ptt file) 0.33 SO0740 melanin biosynthesis protein TyrA, putative (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.27 Shewana3_3031 anti sigma-E protein, RseA (RefSeq) 0.32 Shewana3_3513 Dyp-type peroxidase family protein (RefSeq) — —
Shewanella loihica PV-4 0.26 Shew_1049 anti sigma-E protein, RseA (RefSeq) 0.32 Shew_0864 Dyp-type peroxidase family protein (RefSeq) — —
Shewanella amazonensis SB2B 0.22 Sama_0875 sigma-E factor negative regulatory protein (RefSeq) 0.34 Sama_0670 melanin biosynthesis protein TyrA, putative (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.20 MIT1002_02718 Sigma-E factor negative regulatory protein 0.26 MIT1002_00420 putative deferrochelatase/peroxidase YfeX low > 70

Not shown: 5 genomes with orthologs for CSW01_12480 only; 20 genomes with orthologs for CSW01_10710 only