Conservation of cofitness between CSW01_10365 and CSW01_10535 in Vibrio cholerae E7946 ATCC 55056

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10365 VOC family protein 1.0 CSW01_10535 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.55 8
Shewanella sp. ANA-3 0.39 Shewana3_2421 hypothetical protein (RefSeq) 0.24 Shewana3_1474 FAD dependent oxidoreductase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.35 SO2182 conserved hypothetical protein (NCBI ptt file) 0.22 SO3073 conserved hypothetical protein (NCBI ptt file) low > 76
Dickeya dadantii 3937 0.31 DDA3937_RS10020 VOC family protein 0.48 DDA3937_RS14515 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 74
Pectobacterium carotovorum WPP14 0.29 HER17_RS11900 VOC family protein 0.49 HER17_RS06960 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 75
Escherichia coli BW25113 0.29 b1875 yecM orf, hypothetical protein (VIMSS) 0.49 b2324 b2324 putative peptidase (VIMSS) low > 76
Escherichia fergusonii Becca 0.29 EFB2_02067 Protein YecM 0.49 EFB2_01534 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 86
Escherichia coli Nissle 1917 0.29 ECOLIN_RS10720 VOC family protein 0.49 ECOLIN_RS13465 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC — —
Escherichia coli ECOR38 0.29 HEPCGN_04605 yecM VOC family protein 0.49 HEPCGN_21845 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 88
Escherichia coli BL21 0.29 ECD_01846 putative metal-binding enzyme 0.49 ECD_02249 fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.29 OHPLBJKB_01853 Protein YecM 0.49 OHPLBJKB_01381 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 74
Escherichia coli ECRC102 0.29 NIAGMN_01870 yecM VOC family protein 0.48 NIAGMN_20415 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 80
Escherichia coli ECRC98 0.29 JDDGAC_00765 yecM VOC family protein 0.48 JDDGAC_26600 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 87
Escherichia coli ECRC101 0.29 MCAODC_19215 yecM VOC family protein 0.48 MCAODC_13680 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 87
Escherichia coli ECRC62 0.29 BNILDI_15425 yecM VOC family protein 0.49 BNILDI_13195 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 75
Escherichia coli ECOR27 0.29 NOLOHH_16635 yecM VOC family protein 0.49 NOLOHH_14275 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 76
Escherichia coli ECRC100 0.29 OKFHMN_26190 yecM VOC family protein 0.48 OKFHMN_22640 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 79
Escherichia coli ECRC99 0.29 KEDOAH_01915 yecM VOC family protein 0.48 KEDOAH_05555 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC — —
Serratia liquefaciens MT49 0.28 IAI46_14695 VOC family protein 0.49 IAI46_18000 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 87
Dickeya dianthicola 67-19 0.28 HGI48_RS10050 VOC family protein 0.49 HGI48_RS14485 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 71
Erwinia tracheiphila HP pepo 2.2 0.28 IJEDHG_22060 VOC family protein 0.46 IJEDHG_17850 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 61
Enterobacter asburiae PDN3 0.28 EX28DRAFT_0684 Uncharacterized protein conserved in bacteria 0.48 EX28DRAFT_0280 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF1654 Protein yecM 0.49 GFF1945 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 78
Dickeya dianthicola ME23 0.27 DZA65_RS10460 VOC family protein 0.49 DZA65_RS15420 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 75
Enterobacter sp. TBS_079 0.27 MPMX20_02778 Protein YecM 0.48 MPMX20_03259 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 85
Erwinia tracheiphila SCR3 0.27 LU632_RS13490 VOC family protein 0.46 LU632_RS07800 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 73
Klebsiella michiganensis M5al 0.27 BWI76_RS18205 VOC family protein 0.47 BWI76_RS20410 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC — —
Rahnella sp. WP5 0.27 EX31_RS17315 VOC family protein 0.50 EX31_RS19660 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 89
Klebsiella pneumoniae MKP103 0.25 KDGMDA_25475 VOC family protein 0.47 KDGMDA_27245 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 95
Pantoea agglomerans CFBP13505 P0401 0.25 PagCFBP13505_RS02255 VOC family protein 0.45 PagCFBP13505_RS00130 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 74
Erwinia amylovora T8 0.25 OLJFJH_12795 Protein yecM 0.47 OLJFJH_11180 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 58
Pantoea sp. MT58 0.24 IAI47_08375 VOC family protein 0.45 IAI47_06175 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 76

Not shown: 2 genomes with orthologs for CSW01_10365 only; 48 genomes with orthologs for CSW01_10535 only