Conservation of cofitness between CSW01_16895 and CSW01_09875 in Vibrio cholerae E7946 ATCC 55056

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_16895 DNA-binding response regulator 1.0 CSW01_09875 5'-deoxynucleotidase 0.46 13
Erwinia amylovora T8 0.49 OLJFJH_17030 two-component system response regulator KdpE 0.69 OLJFJH_11395 5'-deoxynucleotidase low > 58
Enterobacter asburiae PDN3 0.49 EX28DRAFT_2284 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 0.72 EX28DRAFT_0318 Predicted hydrolases of HD superfamily low > 76
Enterobacter sp. TBS_079 0.49 MPMX20_01337 KDP operon transcriptional regulatory protein KdpE 0.71 MPMX20_03221 5'-deoxynucleotidase YfbR low > 85
Erwinia tracheiphila SCR3 0.48 LU632_RS16165 kdpE two-component system response regulator KdpE 0.72 LU632_RS07950 yfbR 5'-deoxynucleotidase low > 73
Erwinia tracheiphila HP pepo 2.2 0.48 IJEDHG_02220 kdpE two-component system response regulator KdpE 0.72 IJEDHG_18030 yfbR 5'-deoxynucleotidase 0.65 6
Escherichia coli ECOR38 0.47 HEPCGN_01155 kdpE two-component system response regulator KdpE 0.71 HEPCGN_22025 yfbR 5'-deoxynucleotidase low > 88
Escherichia coli ECOR27 0.47 NOLOHH_23460 kdpE two-component system response regulator KdpE 0.71 NOLOHH_14440 yfbR 5'-deoxynucleotidase low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_03023 KDP operon transcriptional regulatory protein KdpE 0.71 OHPLBJKB_01414 '5'-deoxynucleotidase YfbR' transl_table=11 low > 74
Escherichia coli Nissle 1917 0.47 ECOLIN_RS03750 two-component system response regulator KdpE 0.71 ECOLIN_RS13300 5'-deoxynucleotidase — —
Escherichia coli ECRC62 0.47 BNILDI_21465 kdpE two-component system response regulator KdpE 0.71 BNILDI_13360 yfbR 5'-deoxynucleotidase low > 75
Escherichia fergusonii Becca 0.47 EFB2_03402 KDP operon transcriptional regulatory protein KdpE 0.71 EFB2_01567 5'-deoxynucleotidase YfbR low > 86
Escherichia coli BW25113 0.47 b0694 kdpE DNA-binding response regulator in two-component regulatory system with KdpD (NCBI) 0.71 b2291 yfbR hypothetical protein (NCBI) low > 76
Escherichia coli BL21 0.46 ECD_00651 response regulator in two-component regulatory system with KdpD 0.71 ECD_02216 5'-nucleotidase low > 61
Escherichia coli ECRC102 0.46 NIAGMN_05135 kdpE two-component system response regulator KdpE 0.71 NIAGMN_20590 yfbR 5'-deoxynucleotidase low > 80
Escherichia coli ECRC99 0.46 KEDOAH_20890 kdpE two-component system response regulator KdpE 0.71 KEDOAH_05375 yfbR 5'-deoxynucleotidase — —
Escherichia coli ECRC98 0.46 JDDGAC_10730 kdpE two-component system response regulator KdpE 0.71 JDDGAC_26785 yfbR 5'-deoxynucleotidase low > 87
Pectobacterium carotovorum WPP14 0.46 HER17_RS15050 two-component system response regulator KdpE 0.71 HER17_RS07110 5'-deoxynucleotidase low > 75
Pantoea sp. MT58 0.46 IAI47_13830 two-component system response regulator KdpE 0.68 IAI47_06345 5'-deoxynucleotidase low > 76
Escherichia coli ECRC100 0.46 OKFHMN_07080 kdpE two-component system response regulator KdpE 0.71 OKFHMN_22820 yfbR 5'-deoxynucleotidase low > 79
Dickeya dadantii 3937 0.46 DDA3937_RS06365 two-component system response regulator KdpE 0.70 DDA3937_RS14350 5'-deoxynucleotidase low > 74
Escherichia coli ECRC101 0.46 MCAODC_26295 kdpE two-component system response regulator KdpE 0.71 MCAODC_13860 yfbR 5'-deoxynucleotidase low > 87
Klebsiella pneumoniae MKP103 0.46 KDGMDA_16625 two-component system response regulator KdpE 0.71 KDGMDA_27085 5'-deoxynucleotidase low > 95
Pantoea agglomerans CFBP13505 P0401 0.46 PagCFBP13505_RS03475 two-component system response regulator KdpE 0.67 PagCFBP13505_RS00320 5'-deoxynucleotidase low > 74
Serratia liquefaciens MT49 0.45 IAI46_06160 two-component system response regulator KdpE 0.73 IAI46_17725 5'-deoxynucleotidase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF4606 sensor histidine kinase 0.72 GFF1895 Nucleotidase YfbR, HD superfamily low > 78
Rahnella sp. WP5 0.45 EX31_RS23330 two-component system response regulator KdpE 0.71 EX31_RS19450 5'-deoxynucleotidase low > 89
Dickeya dianthicola 67-19 0.45 HGI48_RS06410 two-component system response regulator KdpE 0.69 HGI48_RS14325 5'-deoxynucleotidase low > 71
Klebsiella michiganensis M5al 0.45 BWI76_RS08300 DNA-binding response regulator 0.70 BWI76_RS20210 5'-deoxynucleotidase — —
Dickeya dianthicola ME23 0.45 DZA65_RS06755 two-component system response regulator KdpE 0.69 DZA65_RS15000 5'-deoxynucleotidase low > 75
Shewanella sp. ANA-3 0.35 Shewana3_0059 two component transcriptional regulator (RefSeq) 0.63 Shewana3_2146 hypothetical protein (RefSeq) — —
Shewanella oneidensis MR-1 0.34 SO0059 kdpE transcriptional regulatory protein KdpE (NCBI ptt file) 0.63 SO2484 conserved hypothetical protein (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.32 MIT1002_01389 KDP operon transcriptional regulatory protein KdpE 0.66 MIT1002_02307 5'-nucleotidase YfbR low > 70

Not shown: 62 genomes with orthologs for CSW01_16895 only; 3 genomes with orthologs for CSW01_09875 only