Conservation of cofitness between CSW01_06100 and CSW01_06225 in Vibrio cholerae E7946 ATCC 55056

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06100 histidine utilization repressor 1.0 CSW01_06225 cytidine deaminase 0.42 18
Dickeya dadantii 3937 0.48 DDA3937_RS15020 histidine utilization repressor 0.39 DDA3937_RS08485 cytidine deaminase low > 74
Dickeya dianthicola ME23 0.47 DZA65_RS15850 histidine utilization repressor 0.39 DZA65_RS08940 cytidine deaminase low > 75
Dickeya dianthicola 67-19 0.47 HGI48_RS15100 histidine utilization repressor 0.39 HGI48_RS08650 cytidine deaminase low > 71
Shewanella sp. ANA-3 0.45 Shewana3_0099 histidine utilization repressor (RefSeq) 0.38 Shewana3_2573 Cytidine deaminase (EC 3.5.4.5) (from data) low > 73
Serratia liquefaciens MT49 0.44 IAI46_10615 histidine utilization repressor 0.43 IAI46_07940 cytidine deaminase low > 86
Rahnella sp. WP5 0.44 EX31_RS06725 histidine utilization repressor 0.44 EX31_RS18660 cytidine deaminase low > 89
Shewanella oneidensis MR-1 0.44 SO0096 hutC histidine utilization repressor (NCBI ptt file) 0.37 SO2791 cdd Cytidine deaminase (EC 3.5.4.5) (from data) low > 76
Shewanella amazonensis SB2B 0.43 Sama_0081 histidine utilization repressor (RefSeq) 0.37 Sama_1974 Cytidine deaminase (EC 3.5.4.5) (from data) low > 62
Enterobacter sp. TBS_079 0.43 MPMX20_01398 HTH-type transcriptional repressor NagR 0.40 MPMX20_03115 Cytidine deaminase low > 85
Pantoea sp. MT58 0.42 IAI47_13270 histidine utilization repressor 0.42 IAI47_06760 cytidine deaminase low > 76
Shewanella loihica PV-4 0.42 Shew_3758 histidine utilization repressor (RefSeq) 0.39 Shew_1610 cytidine deaminase (RefSeq) low > 60
Enterobacter asburiae PDN3 0.41 EX28DRAFT_2221 histidine utilization repressor, proteobacterial 0.41 EX28DRAFT_0412 cytidine deaminase (EC 3.5.4.5) low > 76
Klebsiella michiganensis M5al 0.41 BWI76_RS08730 histidine utilization repressor 0.39 BWI76_RS19610 Cytidine deaminase (EC 3.5.4.5) (from data) low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF665 Histidine utilization repressor 0.41 GFF3795 Cytidine deaminase (EC 3.5.4.5) low > 78
Escherichia coli ECRC100 0.18 OKFHMN_17145 phoB transcriptional regulator PhoB 0.40 OKFHMN_23570 cdd cytidine deaminase low > 80
Escherichia coli ECRC101 0.18 MCAODC_07675 phoB transcriptional regulator PhoB 0.40 MCAODC_14620 cdd cytidine deaminase low > 87
Escherichia coli ECRC98 0.18 JDDGAC_20775 phoB transcriptional regulator PhoB 0.39 JDDGAC_27525 cdd cytidine deaminase low > 86
Escherichia coli ECRC102 0.18 NIAGMN_14915 phoB transcriptional regulator PhoB 0.40 NIAGMN_21335 cdd cytidine deaminase — —
Escherichia coli ECRC99 0.18 KEDOAH_10995 phoB transcriptional regulator PhoB 0.40 KEDOAH_04615 cdd cytidine deaminase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.17 OHPLBJKB_00328 putative fructoselysine utilization operon transcriptional repressor 0.40 OHPLBJKB_01568 Cytidine deaminase low > 73
Escherichia coli BW25113 0.17 b3375 yhfR putative transcriptional regulator (VIMSS) 0.40 b2143 cdd cytidine deaminase (NCBI) low > 76
Escherichia coli BL21 0.17 ECD_03225 putative DNA-binding transcriptional regulator 0.40 ECD_02072 cytidine/deoxycytidine deaminase low > 61
Pectobacterium carotovorum WPP14 0.13 HER17_RS13540 GntR family transcriptional regulator 0.42 HER17_RS13485 cytidine deaminase low > 75

Not shown: 53 genomes with orthologs for CSW01_06100 only; 7 genomes with orthologs for CSW01_06225 only