Conservation of cofitness between CSW01_03335 and CSW01_05550 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03335 ribosome assembly RNA-binding protein YhbY 1.0 CSW01_05550 oligopeptide ABC transporter permease OppB 0.49 15
Pantoea agglomerans CFBP13505 P0401 0.82 PagCFBP13505_RS09170 ribosome assembly RNA-binding protein YhbY 0.68 PagCFBP13505_RS02915 oligopeptide ABC transporter permease OppB low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF2921 FIG004454: RNA binding protein 0.71 GFF2745 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) low > 78
Pantoea sp. MT58 0.81 IAI47_17075 ribosome assembly RNA-binding protein YhbY 0.68 IAI47_09075 oligopeptide ABC transporter permease OppB low > 76
Escherichia coli ECRC98 0.81 JDDGAC_21675 yhbY ribosome assembly RNA-binding protein YhbY 0.71 JDDGAC_05940 oppB oligopeptide ABC transporter permease OppB low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_00520 RNA-binding protein YhbY 0.71 OHPLBJKB_02439 Oligopeptide transport system permease protein OppB low > 74
Escherichia coli ECRC62 0.81 BNILDI_01685 yhbY ribosome assembly RNA-binding protein YhbY 0.71 BNILDI_18560 oppB oligopeptide ABC transporter permease OppB low > 75
Escherichia coli ECRC100 0.81 OKFHMN_18050 yhbY ribosome assembly RNA-binding protein YhbY 0.71 OKFHMN_28635 oppB oligopeptide ABC transporter permease OppB low > 79
Escherichia coli ECOR38 0.81 HEPCGN_16925 yhbY ribosome assembly RNA-binding protein YhbY 0.71 HEPCGN_25100 oppB oligopeptide ABC transporter permease OppB low > 88
Escherichia coli ECOR27 0.81 NOLOHH_09850 yhbY ribosome assembly RNA-binding protein YhbY 0.71 NOLOHH_20415 oppB oligopeptide ABC transporter permease OppB low > 76
Escherichia coli ECRC99 0.81 KEDOAH_10100 yhbY ribosome assembly RNA-binding protein YhbY 0.71 KEDOAH_25630 oppB oligopeptide ABC transporter permease OppB — —
Escherichia coli BW25113 0.81 b3180 yhbY predicted RNA-binding protein (NCBI) 0.71 b1244 oppB oligopeptide permease ABC transporter membrane protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.81 ECOLIN_RS18315 ribosome assembly RNA-binding protein YhbY 0.71 ECOLIN_RS07515 oligopeptide ABC transporter permease OppB low > 55
Escherichia coli ECRC101 0.81 MCAODC_08570 yhbY ribosome assembly RNA-binding protein YhbY 0.71 MCAODC_21625 oppB oligopeptide ABC transporter permease OppB low > 88
Escherichia coli BL21 0.81 ECD_03045 RNA binding protein 0.71 ECD_01218 oligopeptide ABC transporter permease low > 61
Escherichia coli ECRC102 0.81 NIAGMN_15810 yhbY ribosome assembly RNA-binding protein YhbY 0.71 NIAGMN_27600 oppB oligopeptide ABC transporter permease OppB low > 80
Escherichia fergusonii Becca 0.81 EFB2_00643 RNA-binding protein YhbY 0.71 EFB2_02681 Oligopeptide transport system permease protein OppB low > 86
Enterobacter asburiae PDN3 0.80 EX28DRAFT_3231 putative RNA-binding protein, YhbY family 0.71 EX28DRAFT_0869 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components low > 76
Enterobacter sp. TBS_079 0.80 MPMX20_04084 RNA-binding protein YhbY 0.71 MPMX20_02586 Oligopeptide transport system permease protein OppB low > 85
Klebsiella michiganensis M5al 0.80 BWI76_RS25155 RNA-binding protein 0.71 BWI76_RS17235 peptide ABC transporter permease — —
Serratia liquefaciens MT49 0.80 IAI46_01885 ribosome assembly RNA-binding protein YhbY 0.70 IAI46_14200 oligopeptide ABC transporter permease OppB low > 86
Klebsiella pneumoniae MKP103 0.80 KDGMDA_05970 ribosome assembly RNA-binding protein YhbY 0.70 KDGMDA_24470 oligopeptide ABC transporter permease OppB low > 95
Dickeya dianthicola 67-19 0.80 HGI48_RS03190 ribosome assembly RNA-binding protein YhbY 0.69 HGI48_RS10385 oligopeptide ABC transporter permease OppB low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS03185 ribosome assembly RNA-binding protein YhbY 0.69 DZA65_RS10865 oligopeptide ABC transporter permease OppB low > 75
Dickeya dadantii 3937 0.80 DDA3937_RS03020 ribosome assembly RNA-binding protein YhbY 0.69 DDA3937_RS10380 oligopeptide ABC transporter permease OppB low > 74
Pectobacterium carotovorum WPP14 0.78 HER17_RS18325 ribosome assembly RNA-binding protein YhbY 0.70 HER17_RS11015 oligopeptide ABC transporter permease OppB — —
Erwinia tracheiphila HP pepo 2.2 0.77 IJEDHG_13870 yhbY ribosome assembly RNA-binding protein YhbY 0.70 IJEDHG_22740 oppB oligopeptide ABC transporter permease OppB — —
Erwinia amylovora T8 0.77 OLJFJH_07190 ribosome assembly RNA-binding protein YhbY 0.70 OLJFJH_13405 oligopeptide ABC transporter permease OppB low > 58
Erwinia tracheiphila SCR3 0.76 LU632_RS21115 yhbY ribosome assembly RNA-binding protein YhbY 0.70 LU632_RS12875 oppB oligopeptide ABC transporter permease OppB low > 74
Rahnella sp. WP5 0.73 EX31_RS08590 ribosome assembly RNA-binding protein YhbY 0.68 EX31_RS10060 oligopeptide ABC transporter permease OppB low > 89
Methylophilus sp. DMC18 0.50 GFF315 RNA-binding protein 0.29 GFF1314 Nickel transport system permease protein NikB low > 43
Marinobacter adhaerens HP15 0.48 HP15_3075 RNA-binding, CRM domain, prokaryote 0.31 HP15_2806 permease protein, ABC-type oligopeptide transporter low > 73
Pseudomonas sp. S08-1 0.45 OH686_17095 RNA-binding protein YhbY 0.34 OH686_08705 Dipeptide ABC transporter, permease protein DppB low > 80
Pseudomonas putida KT2440 0.44 PP_4720 putative RNA binding protein 0.33 PP_4455 glutathione ABC transporter permease subunit low > 96
Bifidobacterium breve UCC2003 0.31 BBR_RS17295 RNA-binding protein 0.33 BBR_RS16645 ABC transporter permease — —

Not shown: 34 genomes with orthologs for CSW01_03335 only; 30 genomes with orthologs for CSW01_05550 only