Conservation of cofitness between CSW01_12480 and CSW01_05325 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12480 sigma-E factor negative regulatory protein RseA 1.0 CSW01_05325 acetyl-CoA C-acyltransferase FadI 0.44 20
Erwinia amylovora T8 0.36 OLJFJH_10220 anti-sigma-E factor RseA 0.64 OLJFJH_11130 acetyl-CoA C-acyltransferase FadI low > 58
Klebsiella pneumoniae MRSN742743 0.36 GJGHJB_01210 rseA anti-sigma-E factor RseA 0.71 GJGHJB_01443 fadI acetyl-CoA C-acyltransferase FadI — —
Klebsiella pneumoniae MKP103 0.36 KDGMDA_28475 anti-sigma-E factor RseA 0.71 KDGMDA_27295 acetyl-CoA C-acyltransferase FadI low > 94
Klebsiella michiganensis M5al 0.35 BWI76_RS21350 anti-RNA polymerase sigma factor SigE 0.74 BWI76_RS20460 acetyl-CoA C-acyltransferase FadI low > 92
Escherichia coli ECRC102 0.35 NIAGMN_19150 rseA anti-sigma-E factor RseA 0.71 NIAGMN_20330 fadI acetyl-CoA C-acyltransferase FadI low > 80
Escherichia coli ECRC101 0.35 MCAODC_11910 rseA anti-sigma-E factor RseA 0.71 MCAODC_13585 fadI acetyl-CoA C-acyltransferase FadI low > 87
Escherichia coli ECRC98 0.35 JDDGAC_25045 rseA anti-sigma-E factor RseA 0.71 JDDGAC_26515 fadI acetyl-CoA C-acyltransferase FadI low > 87
Escherichia coli ECRC100 0.35 OKFHMN_21380 rseA anti-sigma-E factor RseA 0.71 OKFHMN_22555 fadI acetyl-CoA C-acyltransferase FadI — —
Escherichia coli ECRC99 0.35 KEDOAH_06840 rseA anti-sigma-E factor RseA 0.70 KEDOAH_05640 fadI acetyl-CoA C-acyltransferase FadI — —
Pantoea sp. MT58 0.35 IAI47_04855 anti-sigma-E factor RseA 0.65 IAI47_06125 acetyl-CoA C-acyltransferase FadI low > 76
Pantoea agglomerans CFBP13505 P0401 0.35 PagCFBP13516_RS05145 rseA anti-sigma-E factor RseA 0.65 PagCFBP13516_RS06315 fadI acetyl-CoA C-acyltransferase FadI — —
Rahnella sp. WP5 0.33 EX31_RS21805 anti-sigma-E factor RseA 0.70 EX31_RS19710 acetyl-CoA C-acyltransferase FadI low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF2108 Sigma factor RpoE negative regulatory protein RseA 0.69 GFF1955 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.33 OHPLBJKB_01135 Anti-sigma-E factor RseA 0.70 OHPLBJKB_01364 3-ketoacyl-CoA thiolase FadI low > 74
Enterobacter asburiae PDN3 0.33 EX28DRAFT_0073 Negative regulator of sigma E activity 0.72 EX28DRAFT_0270 fatty oxidation complex, beta subunit FadI low > 76
Pectobacterium carotovorum WPP14 0.32 HER17_RS05785 anti-sigma-E factor RseA 0.71 HER17_RS06885 acetyl-CoA C-acyltransferase FadI — —
Escherichia fergusonii Becca 0.32 EFB2_01324 Anti-sigma-E factor RseA 0.71 EFB2_01517 3-ketoacyl-CoA thiolase FadI low > 86
Escherichia coli ECOR38 0.32 HEPCGN_20525 rseA anti-sigma-E factor RseA 0.71 HEPCGN_21750 fadI acetyl-CoA C-acyltransferase FadI low > 88
Escherichia coli ECRC62 0.32 BNILDI_11855 rseA anti-sigma-E factor RseA 0.71 BNILDI_13105 fadI acetyl-CoA C-acyltransferase FadI low > 75
Escherichia coli ECOR27 0.32 NOLOHH_13055 rseA anti-sigma-E factor RseA 0.71 NOLOHH_14190 fadI acetyl-CoA C-acyltransferase FadI low > 75
Escherichia coli Nissle 1917 0.32 ECOLIN_RS14555 anti-sigma-E factor RseA 0.71 ECOLIN_RS13555 acetyl-CoA C-acyltransferase FadI low > 55
Escherichia coli BL21 0.32 ECD_02466 anti-sigma factor 0.71 ECD_02266 beta-ketoacyl-CoA thiolase, anaerobic, subunit — —
Escherichia coli BW25113 0.32 b2572 rseA anti-sigma factor (NCBI) 0.71 b2342 yfcY acetyl-CoA acetyltransferase (NCBI) low > 76
Enterobacter sp. TBS_079 0.32 MPMX20_03443 Anti-sigma-E factor RseA 0.72 MPMX20_03269 3-ketoacyl-CoA thiolase FadI low > 85
Dickeya dianthicola 67-19 0.31 HGI48_RS15845 anti-sigma-E factor RseA 0.66 HGI48_RS14555 acetyl-CoA C-acyltransferase FadI — —
Dickeya dadantii 3937 0.30 DDA3937_RS15760 anti-sigma-E factor RseA 0.66 DDA3937_RS14605 acetyl-CoA C-acyltransferase FadI — —
Serratia liquefaciens MT49 0.29 IAI46_19580 anti-sigma-E factor RseA 0.75 IAI46_18050 acetyl-CoA C-acyltransferase FadI low > 87
Shewanella oneidensis MR-1 0.27 SO1343 rseA sigma-E factor negative regulatory protein (NCBI ptt file) 0.73 SO3089 fatty oxidation complex, beta subunit (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.27 Shewana3_3031 anti sigma-E protein, RseA (RefSeq) 0.74 Shewana3_1460 fadI 3-ketoacyl-CoA thiolase (RefSeq) — —
Shewanella loihica PV-4 0.26 Shew_1049 anti sigma-E protein, RseA (RefSeq) 0.73 Shew_2426 fadI 3-ketoacyl-CoA thiolase (RefSeq) — —

Not shown: 3 genomes with orthologs for CSW01_12480 only; 43 genomes with orthologs for CSW01_05325 only