Conservation of cofitness between CSW01_14085 and CSW01_05065 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14085 transcriptional regulator 1.0 CSW01_05065 N-acetylglucosamine repressor 0.78 16
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_01725 putative transcriptional regulatory protein YeeN 0.61 OHPLBJKB_03039 N-acetylglucosamine repressor low > 74
Escherichia fergusonii Becca 0.39 EFB2_01929 putative transcriptional regulatory protein YeeN 0.61 EFB2_03427 N-acetylglucosamine repressor low > 86
Escherichia coli Nissle 1917 0.39 ECOLIN_RS11460 YebC/PmpR family DNA-binding transcriptional regulator 0.61 ECOLIN_RS03610 DNA-binding transcriptional regulator NagC — —
Escherichia coli BL21 0.39 ECD_01895 UPF0082 family protein 0.61 ECD_00633 N-acetylglucosamine-inducible nag divergent operon transcriptional repressor — —
Escherichia coli BW25113 0.39 b1983 yeeN hypothetical protein (NCBI) 0.61 b0676 nagC DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) low > 76
Escherichia coli ECRC62 0.39 BNILDI_14915 ycdB putative transcriptional regulatory protein YcdB 0.61 BNILDI_21555 nagC DNA-binding transcriptional regulator NagC low > 75
Escherichia coli ECRC102 0.39 NIAGMN_22680 ycdB putative transcriptional regulatory protein YcdB 0.61 NIAGMN_05225 nagC DNA-binding transcriptional regulator NagC — —
Escherichia coli ECOR38 0.39 HEPCGN_03510 ycdB putative transcriptional regulatory protein YcdB 0.61 HEPCGN_01060 nagC DNA-binding transcriptional regulator NagC low > 88
Escherichia coli ECOR27 0.39 NOLOHH_16120 ycdB putative transcriptional regulatory protein YcdB 0.61 NOLOHH_23550 nagC DNA-binding transcriptional regulator NagC — —
Escherichia coli ECRC99 0.39 KEDOAH_02935 ycdB putative transcriptional regulatory protein YcdB 0.61 KEDOAH_20800 nagC DNA-binding transcriptional regulator NagC — —
Escherichia coli ECRC98 0.39 JDDGAC_29305 ycdB putative transcriptional regulatory protein YcdB 0.61 JDDGAC_10820 nagC DNA-binding transcriptional regulator NagC low > 87
Escherichia coli ECRC101 0.39 MCAODC_20215 ycdB putative transcriptional regulatory protein YcdB 0.61 MCAODC_26385 nagC DNA-binding transcriptional regulator NagC low > 87
Escherichia coli ECRC100 0.39 OKFHMN_25175 ycdB putative transcriptional regulatory protein YcdB 0.61 OKFHMN_07170 nagC DNA-binding transcriptional regulator NagC low > 79
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF969 FIG007491: hypothetical protein YeeN 0.61 GFF4584 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family low > 78
Klebsiella michiganensis M5al 0.33 BWI76_RS18160 YebC/PmpR family DNA-binding transcriptional regulator 0.61 BWI76_RS08205 DNA-binding transcriptional dual regulator NagC — —
Enterobacter asburiae PDN3 0.33 EX28DRAFT_0693 DNA-binding regulatory protein, YebC/PmpR family 0.61 EX28DRAFT_2299 Transcriptional regulator/sugar kinase low > 76
Klebsiella pneumoniae MKP103 0.33 KDGMDA_25425 putative transcriptional regulatory protein KPK_1906 0.61 KDGMDA_16550 transcriptional regulator low > 95
Pantoea agglomerans CFBP13505 P0401 0.33 PagCFBP13505_RS02315 YebC/PmpR family DNA-binding transcriptional regulator 0.62 PagCFBP13505_RS03415 ROK family transcriptional regulator low > 74
Pectobacterium carotovorum WPP14 0.33 HER17_RS11855 YebC/PmpR family DNA-binding transcriptional regulator 0.61 HER17_RS15115 ROK family protein low > 75
Pantoea sp. MT58 0.33 IAI47_08435 YebC/PmpR family DNA-binding transcriptional regulator 0.62 IAI47_13890 ROK family transcriptional regulator low > 76
Serratia liquefaciens MT49 0.32 IAI46_14635 YebC/PmpR family DNA-binding transcriptional regulator 0.63 IAI46_06080 ROK family transcriptional regulator low > 87
Rahnella sp. WP5 0.32 EX31_RS11685 YebC/PmpR family DNA-binding transcriptional regulator 0.63 EX31_RS23255 ROK family protein low > 89
Enterobacter sp. TBS_079 0.32 MPMX20_02769 putative transcriptional regulatory protein YebC 0.61 MPMX20_01322 N-acetylglucosamine repressor low > 85
Dickeya dianthicola 67-19 0.31 HGI48_RS10095 YebC/PmpR family DNA-binding transcriptional regulator 0.62 HGI48_RS06345 ROK family protein low > 71
Dickeya dianthicola ME23 0.31 DZA65_RS10510 YebC/PmpR family DNA-binding transcriptional regulator 0.62 DZA65_RS06690 ROK family protein low > 75
Erwinia tracheiphila SCR3 0.31 LU632_RS13425 YebC/PmpR family DNA-binding transcriptional regulator 0.60 LU632_RS16255 ROK family transcriptional regulator low > 73
Erwinia tracheiphila HP pepo 2.2 0.31 IJEDHG_22125 tACO1 YebC/PmpR family DNA-binding transcriptional regulator 0.60 IJEDHG_02310 transcriptional regulator — —
Erwinia amylovora T8 0.30 OLJFJH_12845 YebC/PmpR family DNA-binding transcriptional regulator 0.61 OLJFJH_17095 transcriptional regulator low > 58
Rhizobium sp. OAE497 0.30 ABIE40_RS15665 YebC/PmpR family DNA-binding transcriptional regulator 0.11 ABIE40_RS23550 ROK family transcriptional regulator low > 107
Variovorax sp. SCN45 0.29 GFF303 Probable transcriptional regulatory protein YebC 0.17 GFF3689 FIG01198523: hypothetical protein low > 127
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.1434.1 FIG000859: hypothetical protein YebC 0.08 Xcc-8004.64.1 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family low > 74
Acidovorax sp. GW101-3H11 0.29 Ac3H11_2422 FIG000859: hypothetical protein 0.17 Ac3H11_2882 FIG01198523: hypothetical protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.27 GFF4523 FIG000859: hypothetical protein YebC 0.20 GFF200 FIG01198523: hypothetical protein — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.26 Echvi_1239 DNA-binding regulatory protein, YebC/PmpR family 0.12 Echvi_3892 Transcriptional regulator/sugar kinase — —
Azospirillum sp. SherDot2 0.24 MPMX19_00695 putative transcriptional regulatory protein 0.15 MPMX19_03621 N-acetylglucosamine repressor low > 112

Not shown: 86 genomes with orthologs for CSW01_14085 only; 0 genomes with orthologs for CSW01_05065 only