Conservation of cofitness between CSW01_14055 and CSW01_05065 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14055 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 1.0 CSW01_05065 N-acetylglucosamine repressor 0.80 4
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF1716 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 0.61 GFF4584 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family low > 78
Dickeya dianthicola 67-19 0.80 HGI48_RS21380 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.62 HGI48_RS06345 ROK family protein low > 71
Dickeya dianthicola ME23 0.79 DZA65_RS22360 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.62 DZA65_RS06690 ROK family protein low > 75
Pectobacterium carotovorum WPP14 0.79 HER17_RS21600 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.61 HER17_RS15115 ROK family protein low > 75
Klebsiella pneumoniae MKP103 0.79 KDGMDA_08840 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.61 KDGMDA_16550 transcriptional regulator low > 95
Escherichia coli ECRC98 0.79 JDDGAC_18405 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.61 JDDGAC_10820 nagC DNA-binding transcriptional regulator NagC low > 87
Escherichia coli ECRC102 0.79 NIAGMN_12540 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.61 NIAGMN_05225 nagC DNA-binding transcriptional regulator NagC low > 80
Escherichia coli ECRC101 0.79 MCAODC_05290 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.61 MCAODC_26385 nagC DNA-binding transcriptional regulator NagC — —
Escherichia coli ECRC100 0.79 OKFHMN_14785 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.61 OKFHMN_07170 nagC DNA-binding transcriptional regulator NagC — —
Pantoea agglomerans CFBP13505 P0401 0.79 PagCFBP13505_RS19035 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.62 PagCFBP13505_RS03415 ROK family transcriptional regulator low > 74
Escherichia coli ECRC99 0.79 KEDOAH_13365 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.61 KEDOAH_20800 nagC DNA-binding transcriptional regulator NagC — —
Escherichia coli Nissle 1917 0.79 ECOLIN_RS21515 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.61 ECOLIN_RS03610 DNA-binding transcriptional regulator NagC — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_04312 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 0.61 OHPLBJKB_03039 N-acetylglucosamine repressor — —
Escherichia coli BW25113 0.79 b3741 gidA glucose-inhibited division protein A (NCBI) 0.61 b0676 nagC DNA-binding transcriptional dual regulator, repressor of N-acetylglucosamine (NCBI) low > 76
Escherichia fergusonii Becca 0.79 EFB2_04892 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 0.61 EFB2_03427 N-acetylglucosamine repressor low > 86
Escherichia coli ECOR27 0.79 NOLOHH_06920 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.61 NOLOHH_23550 nagC DNA-binding transcriptional regulator NagC low > 76
Escherichia coli ECOR38 0.79 HEPCGN_13500 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.61 HEPCGN_01060 nagC DNA-binding transcriptional regulator NagC low > 88
Escherichia coli ECRC62 0.79 BNILDI_04605 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.61 BNILDI_21555 nagC DNA-binding transcriptional regulator NagC low > 75
Klebsiella michiganensis M5al 0.79 BWI76_RS00230 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 0.61 BWI76_RS08205 DNA-binding transcriptional dual regulator NagC — —
Enterobacter asburiae PDN3 0.79 EX28DRAFT_4017 glucose-inhibited division protein A 0.61 EX28DRAFT_2299 Transcriptional regulator/sugar kinase — —
Escherichia coli BL21 0.79 ECD_03625 5-methylaminomethyl-2-thiouridine modification at tRNA U34 0.61 ECD_00633 N-acetylglucosamine-inducible nag divergent operon transcriptional repressor low > 61
Enterobacter sp. TBS_079 0.79 MPMX20_04626 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 0.61 MPMX20_01322 N-acetylglucosamine repressor low > 85
Rahnella sp. WP5 0.79 EX31_RS06140 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.63 EX31_RS23255 ROK family protein low > 89
Serratia liquefaciens MT49 0.79 IAI46_25110 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.63 IAI46_06080 ROK family transcriptional regulator 0.75 68
Pantoea sp. MT58 0.79 IAI47_00300 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.62 IAI47_13890 ROK family transcriptional regulator low > 76
Erwinia tracheiphila HP pepo 2.2 0.77 IJEDHG_09160 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.60 IJEDHG_02310 transcriptional regulator — —
Erwinia amylovora T8 0.76 OLJFJH_05320 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.61 OLJFJH_17095 transcriptional regulator — —
Erwinia tracheiphila SCR3 0.76 LU632_RS24815 mnmG tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG 0.60 LU632_RS16255 ROK family transcriptional regulator — —
Variovorax sp. SCN45 0.66 GFF3336 tRNA-5-carboxymethylaminomethyl-2-thiouridine(34) synthesis protein MnmG 0.17 GFF3689 FIG01198523: hypothetical protein — —
Xanthomonas campestris pv. campestris strain 8004 0.64 Xcc-8004.488.1 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 0.08 Xcc-8004.64.1 N-acetylglucosamine-6P-responsive transcriptional repressor NagC, ROK family low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.64 GFF2018 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 0.20 GFF200 FIG01198523: hypothetical protein — —
Acidovorax sp. GW101-3H11 0.63 Ac3H11_4956 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 0.17 Ac3H11_2882 FIG01198523: hypothetical protein low > 79
Echinicola vietnamensis KMM 6221, DSM 17526 0.46 Echvi_1059 glucose-inhibited division protein A 0.12 Echvi_3892 Transcriptional regulator/sugar kinase — —
Azospirillum sp. SherDot2 0.45 MPMX19_02569 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 0.15 MPMX19_03621 N-acetylglucosamine repressor — —

Not shown: 84 genomes with orthologs for CSW01_14055 only; 1 genomes with orthologs for CSW01_05065 only