Conservation of cofitness between CSW01_03550 and CSW01_04600 in Vibrio cholerae E7946 ATCC 55056

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03550 transcriptional activator protein NhaR 1.0 CSW01_04600 flap endonuclease Xni 0.52 6
Serratia liquefaciens MT49 0.68 IAI46_03090 transcriptional activator NhaR 0.46 IAI46_20325 flap endonuclease Xni low > 87
Enterobacter sp. TBS_079 0.66 MPMX20_00723 Transcriptional activator protein NhaR 0.49 MPMX20_03668 Flap endonuclease Xni low > 85
Dickeya dadantii 3937 0.66 DDA3937_RS18355 transcriptional activator NhaR 0.48 DDA3937_RS05065 flap endonuclease Xni — —
Pectobacterium carotovorum WPP14 0.66 HER17_RS02855 transcriptional activator NhaR 0.48 HER17_RS16400 flap endonuclease Xni low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.66 GFF1120 Transcriptional activator NhaR 0.47 GFF4854 DNA polymerase I (EC 2.7.7.7) low > 78
Enterobacter asburiae PDN3 0.66 EX28DRAFT_3629 Transcriptional regulator 0.48 EX28DRAFT_2880 5'-3' exonuclease (including N-terminal domain of PolI) low > 76
Klebsiella michiganensis M5al 0.66 BWI76_RS04320 transcriptional activator NhaR 0.47 BWI76_RS22910 flap endonuclease Xni low > 92
Escherichia coli Nissle 1917 0.65 ECOLIN_RS00110 transcriptional activator NhaR 0.46 ECOLIN_RS15600 flap endonuclease Xni low > 55
Escherichia fergusonii Becca 0.65 EFB2_04023 Transcriptional activator protein NhaR 0.47 EFB2_01119 Flap endonuclease Xni low > 86
Klebsiella pneumoniae MKP103 0.65 KDGMDA_12590 transcriptional activator NhaR 0.49 KDGMDA_03465 flap endonuclease Xni low > 94
Klebsiella pneumoniae MRSN742743 0.65 GJGHJB_04259 nhaR transcriptional activator NhaR 0.49 GJGHJB_00949 xni flap endonuclease Xni low > 83
Rahnella sp. WP5 0.65 EX31_RS03885 transcriptional activator NhaR 0.43 EX31_RS13095 flap endonuclease Xni low > 89
Escherichia coli ECRC62 0.64 BNILDI_08250 nhaR transcriptional activator NhaR 0.47 BNILDI_10555 xni flap endonuclease Xni low > 75
Escherichia coli BW25113 0.64 b0020 nhaR DNA-binding transcriptional activator (NCBI) 0.46 b2798 ygdG Ssb-binding protein, misidentified as ExoIX (RefSeq) low > 76
Escherichia coli ECOR38 0.64 HEPCGN_09010 nhaR transcriptional activator NhaR 0.46 HEPCGN_19425 xni flap endonuclease Xni low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.64 OHPLBJKB_03641 Transcriptional activator protein NhaR 0.47 OHPLBJKB_00933 Flap endonuclease Xni low > 74
Escherichia coli BL21 0.64 ECD_00019 transcriptional activator of nhaA 0.47 ECD_02643 Ssb-binding protein, misidentified as ExoIX low > 61
Escherichia coli ECOR27 0.64 NOLOHH_03355 nhaR transcriptional activator NhaR 0.47 NOLOHH_12050 xni flap endonuclease Xni low > 75
Escherichia coli ECRC99 0.64 KEDOAH_17130 nhaR transcriptional activator NhaR 0.46 KEDOAH_07960 xni flap endonuclease Xni — —
Escherichia coli ECRC100 0.64 OKFHMN_11025 nhaR transcriptional activator NhaR 0.46 OKFHMN_20170 xni flap endonuclease Xni low > 79
Escherichia coli ECRC98 0.64 JDDGAC_14620 nhaR transcriptional activator NhaR 0.46 JDDGAC_23835 xni flap endonuclease Xni low > 87
Escherichia coli ECRC102 0.64 NIAGMN_08875 nhaR transcriptional activator NhaR 0.46 NIAGMN_17940 xni flap endonuclease Xni low > 80
Escherichia coli ECRC101 0.64 MCAODC_01540 nhaR transcriptional activator NhaR 0.46 MCAODC_10695 xni flap endonuclease Xni low > 87
Pantoea sp. MT58 0.62 IAI47_16160 transcriptional activator NhaR 0.45 IAI47_04040 flap endonuclease Xni low > 76
Pantoea agglomerans CFBP13505 P0401 0.61 PagCFBP13516_RS16470 nhaR transcriptional activator NhaR 0.45 PagCFBP13516_RS04310 xni flap endonuclease Xni low > 80
Shewanella loihica PV-4 0.60 Shew_1044 nhaR transcriptional activator NhaR (RefSeq) 0.30 Shew_2756 xni exonuclease IX (RefSeq) low > 60
Shewanella sp. ANA-3 0.59 Shewana3_3036 nhaR transcriptional activator NhaR (RefSeq) 0.31 Shewana3_2886 xni exonuclease IX (RefSeq) low > 73
Shewanella amazonensis SB2B 0.57 Sama_0870 nhaR transcriptional activator NhaR (RefSeq) 0.30 Sama_2420 xni exonuclease IX (RefSeq) low > 62

Not shown: 26 genomes with orthologs for CSW01_03550 only; 5 genomes with orthologs for CSW01_04600 only