Conservation of cofitness between CSW01_10270 and CSW01_03920 in Vibrio cholerae E7946 ATCC 55056

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10270 cytochrome c-type biogenesis protein CcmE 1.0 CSW01_03920 peptidase B 0.87 15
Shewanella amazonensis SB2B 0.65 Sama_0241 cytochrome c-type biogenesis protein CcmE (RefSeq) 0.44 Sama_0782 aminopeptidase B (RefSeq) low > 62
Shewanella loihica PV-4 0.64 Shew_0186 cytochrome c-type biogenesis protein CcmE (RefSeq) 0.42 Shew_3127 aminopeptidase B (RefSeq) — —
Shewanella sp. ANA-3 0.63 Shewana3_0227 cytochrome c-type biogenesis protein CcmE (RefSeq) 0.42 Shewana3_3402 aminopeptidase B (RefSeq) low > 73
Shewanella oneidensis MR-1 0.62 SO0259 ccmE cytochrome c biogenesis protein CcmE (NCBI ptt file) 0.43 SO0876 pepB peptidase B (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.62 MIT1002_00964 Heme chaperone CcmE 0.45 MIT1002_03688 Peptidase B — —
Rahnella sp. WP5 0.58 EX31_RS19750 cytochrome c maturation protein CcmE 0.59 EX31_RS20540 aminopeptidase PepB low > 89
Escherichia coli ECOR27 0.58 NOLOHH_14875 ccmE cytochrome c maturation protein CcmE 0.62 NOLOHH_13325 pepB aminopeptidase PepB low > 76
Escherichia coli ECRC98 0.58 JDDGAC_27260 ccmE cytochrome c maturation protein CcmE 0.62 JDDGAC_25330 pepB aminopeptidase PepB low > 87
Escherichia coli ECRC102 0.58 NIAGMN_21065 ccmE cytochrome c maturation protein CcmE 0.62 NIAGMN_19425 pepB aminopeptidase PepB low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_01514 Cytochrome c-type biogenesis protein CcmE 0.62 OHPLBJKB_01186 Peptidase B low > 74
Escherichia coli ECRC62 0.58 BNILDI_13795 ccmE cytochrome c maturation protein CcmE 0.62 BNILDI_12125 pepB aminopeptidase PepB low > 75
Escherichia coli Nissle 1917 0.58 ECOLIN_RS12840 cytochrome c maturation protein CcmE 0.61 ECOLIN_RS14330 aminopeptidase PepB — —
Escherichia coli ECRC99 0.58 KEDOAH_04885 ccmE cytochrome c maturation protein CcmE 0.62 KEDOAH_06565 pepB aminopeptidase PepB — —
Escherichia fergusonii Becca 0.58 EFB2_01659 Cytochrome c-type biogenesis protein CcmE 0.61 EFB2_01367 Peptidase B low > 86
Escherichia coli ECOR38 0.58 HEPCGN_22565 ccmE cytochrome c maturation protein CcmE 0.60 HEPCGN_20795 pepB aminopeptidase PepB low > 88
Escherichia coli BL21 0.58 ECD_02124 periplasmic heme chaperone 0.62 ECD_02415 aminopeptidase B low > 61
Escherichia coli BW25113 0.58 b2197 ccmE periplasmic heme chaperone (NCBI) 0.61 b2523 pepB putative peptidase (VIMSS) low > 76
Escherichia coli ECRC101 0.58 MCAODC_14350 ccmE cytochrome c maturation protein CcmE 0.62 MCAODC_12185 pepB aminopeptidase PepB low > 88
Escherichia coli ECRC100 0.58 OKFHMN_23300 ccmE cytochrome c maturation protein CcmE 0.62 OKFHMN_21655 pepB aminopeptidase PepB low > 79
Serratia liquefaciens MT49 0.57 IAI46_18090 cytochrome c maturation protein CcmE 0.63 IAI46_19320 aminopeptidase PepB low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.56 GFF4878 Cytochrome c-type biogenesis protein CcmE, heme chaperone 0.60 GFF2428 Peptidase B (EC 3.4.11.23) — —
Erwinia amylovora T8 0.54 OLJFJH_11095 cytochrome c maturation protein CcmE 0.63 OLJFJH_10370 aminopeptidase PepB low > 58
Pantoea agglomerans CFBP13505 P0401 0.53 PagCFBP13505_RS00040 cytochrome c maturation protein CcmE 0.60 PagCFBP13505_RS14900 aminopeptidase PepB low > 74
Pectobacterium carotovorum WPP14 0.53 HER17_RS09050 cytochrome c maturation protein CcmE 0.58 HER17_RS06050 aminopeptidase PepB low > 75
Klebsiella pneumoniae MKP103 0.51 KDGMDA_23850 cytochrome c maturation protein CcmE 0.61 KDGMDA_28250 aminopeptidase PepB low > 95
Pantoea sp. MT58 0.48 IAI47_06085 cytochrome c maturation protein CcmE 0.60 IAI47_05010 aminopeptidase PepB low > 76
Kangiella aquimarina DSM 16071 0.45 B158DRAFT_1327 Cytochrome c-type biogenesis protein CcmE 0.45 B158DRAFT_0048 Leucyl aminopeptidase low > 40
Rhodospirillum rubrum S1H 0.38 Rru_A0036 CcmE/CycJ protein (NCBI) 0.24 Rru_A0138 Leucyl aminopeptidase (NCBI) — —

Not shown: 43 genomes with orthologs for CSW01_10270 only; 8 genomes with orthologs for CSW01_03920 only