Conservation of cofitness between CSW01_06080 and CSW01_03820 in Vibrio cholerae E7946 ATCC 55056

15 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06080 histidine ammonia-lyase 1.0 CSW01_03820 hydrogen peroxide-inducible genes activator 0.55 4
Shewanella sp. ANA-3 0.74 Shewana3_0101 histidine ammonia-lyase (RefSeq) 0.56 Shewana3_3046 LysR family transcriptional regulator (RefSeq) low > 73
Shewanella oneidensis MR-1 0.74 SO0098 hutH histidine ammonia-lyase (NCBI ptt file) 0.56 SO1328 transcriptional regulator, LysR family (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.73 Shew_3756 histidine ammonia-lyase (RefSeq) 0.51 Shew_1035 LysR family transcriptional regulator (RefSeq) low > 60
Acinetobacter baumannii LAC-4 0.71 RR41_RS00385 histidine ammonia-lyase 0.32 RR41_RS08890 hydrogen peroxide-inducible genes activator low > 55
Alteromonas macleodii MIT1002 0.70 MIT1002_00905 Histidine ammonia-lyase 0.42 MIT1002_00881 Morphology and auto-aggregation control protein low > 70
Kangiella aquimarina DSM 16071 0.65 B158DRAFT_1432 histidine ammonia-lyase (EC 4.3.1.3) 0.29 B158DRAFT_0277 Transcriptional regulator 0.27 34
Rhodospirillum rubrum S1H 0.55 Rru_A1301 Histidine ammonia-lyase (NCBI) 0.35 Rru_A0334 Transcriptional Regulator, LysR family (NCBI) low > 58
Brevundimonas sp. GW460-12-10-14-LB2 0.53 A4249_RS06630 histidine ammonia-lyase 0.34 A4249_RS12755 hydrogen peroxide-inducible genes activator low > 48
Azospirillum sp. SherDot2 0.53 MPMX19_04940 Histidine ammonia-lyase 0.39 MPMX19_05834 Hydrogen peroxide-inducible genes activator low > 112
Caulobacter crescentus NA1000 Δfur 0.51 CCNA_01010 histidine ammonia-lyase 0.33 CCNA_03811 LysR-family transcriptional regulator — —
Caulobacter crescentus NA1000 0.51 CCNA_01010 histidine ammonia-lyase 0.33 CCNA_03811 LysR-family transcriptional regulator low > 66
Sphingobium sp. HT1-2 0.50 GFF1212 Histidine ammonia-lyase (EC 4.3.1.3) 0.32 GFF1271 Hydrogen peroxide-inducible genes activator => OxyR low > 95
Sphingomonas koreensis DSMZ 15582 0.49 Ga0059261_3963 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.33 Ga0059261_0159 Transcriptional regulator low > 68
Phaeobacter inhibens DSM 17395 0.46 PGA1_c36340 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.31 PGA1_78p00040 hydrogen peroxide-inducible genes activator OxyR — —
Shewanella amazonensis SB2B 0.38 Sama_1631 Histidine ammonia-lyase (EC 4.3.1.3) (from data) 0.52 Sama_0860 LysR family transcriptional regulator (RefSeq) low > 62

Not shown: 73 genomes with orthologs for CSW01_06080 only; 2 genomes with orthologs for CSW01_03820 only