Conservation of cofitness between CSW01_09855 and CSW01_03470 in Vibrio cholerae E7946 ATCC 55056

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09855 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 1.0 CSW01_03470 peptide chain release factor 3 0.59 19
Pectobacterium carotovorum WPP14 0.39 HER17_RS15550 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.85 HER17_RS19065 peptide chain release factor 3 low > 75
Dickeya dianthicola 67-19 0.39 HGI48_RS05965 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.86 HGI48_RS02400 peptide chain release factor 3
Dickeya dianthicola ME23 0.38 DZA65_RS06300 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.86 DZA65_RS02505 peptide chain release factor 3 low > 75
Dickeya dadantii 3937 0.37 DDA3937_RS05920 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.86 DDA3937_RS02445 peptide chain release factor 3 low > 74
Serratia liquefaciens MT49 0.36 IAI46_17555 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.86 IAI46_02875 peptide chain release factor 3 low > 86
Rahnella sp. WP5 0.36 EX31_RS19350 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.86 EX31_RS04095 peptide chain release factor 3
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.35 GFF1869 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate synthase (EC 4.2.99.20) 0.86 GFF1035 Peptide chain release factor 3 low > 78
Klebsiella pneumoniae MKP103 0.35 KDGMDA_26985 2-succinyl-6-hydroxy-2 4-cyclohexadiene-1-carboxylate synthase 0.86 KDGMDA_12370 peptide chain release factor 3 low > 95
Escherichia coli ECRC62 0.35 BNILDI_13480 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase 0.86 BNILDI_08000 prfC peptide chain release factor 3 low > 75
Escherichia coli ECOR27 0.35 NOLOHH_14565 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase 0.86 NOLOHH_03600 prfC peptide chain release factor 3 low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_01447 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.86 OHPLBJKB_03687 Peptide chain release factor RF3 0.39 20
Escherichia coli ECRC100 0.35 OKFHMN_22940 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase 0.86 OKFHMN_11280 prfC peptide chain release factor 3 low > 79
Escherichia coli ECRC99 0.35 KEDOAH_05255 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase 0.86 KEDOAH_16865 prfC peptide chain release factor 3
Escherichia coli ECRC102 0.35 NIAGMN_20710 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase 0.86 NIAGMN_09130 prfC peptide chain release factor 3 low > 80
Escherichia coli ECRC101 0.35 MCAODC_13980 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase 0.86 MCAODC_01795 prfC peptide chain release factor 3 low > 88
Escherichia coli ECRC98 0.35 JDDGAC_26905 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase 0.86 JDDGAC_14875 prfC peptide chain release factor 3 low > 87
Escherichia coli BL21 0.34 ECD_02190 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.86 ECD_04250 peptide chain release factor RF-3 low > 61
Escherichia coli BW25113 0.34 b2263 yfbB predicted peptidase (NCBI) 0.86 b4375 prfC peptide chain release factor 3 (NCBI) low > 76
Escherichia fergusonii Becca 0.34 EFB2_01592 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.86 EFB2_04072 Peptide chain release factor RF3 low > 86
Escherichia coli ECOR38 0.34 HEPCGN_22155 menH 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxy late synthase 0.86 HEPCGN_09285 prfC peptide chain release factor 3 low > 88
Escherichia coli Nissle 1917 0.34 ECOLIN_RS13180 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.86 ECOLIN_RS25110 peptide chain release factor 3
Erwinia tracheiphila HP pepo 2.2 0.33 IJEDHG_18175 menH 2-succinyl-6-hydroxy-2 4-cyclohexadiene-1-carboxylate synthase 0.85 IJEDHG_06470 prfC peptide chain release factor 3 low > 61
Erwinia tracheiphila SCR3 0.33 LU632_RS08110 menH 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.85 LU632_RS02475 prfC peptide chain release factor 3 low > 74
Klebsiella michiganensis M5al 0.32 BWI76_RS20070 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.87 BWI76_RS04100 peptide chain release factor 3
Enterobacter sp. TBS_079 0.32 MPMX20_03199 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 0.87 MPMX20_00673 Peptide chain release factor RF3 low > 85
Enterobacter asburiae PDN3 0.32 EX28DRAFT_0341 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 0.87 EX28DRAFT_3583 peptide chain release factor 3 low > 76
Shewanella loihica PV-4 0.26 Shew_3600 alpha/beta hydrolase fold (RefSeq) 0.80 Shew_2820 prfC peptide chain release factor 3 (RefSeq) low > 60
Shewanella amazonensis SB2B 0.25 Sama_3461 alpha/beta fold family hydrolase (RefSeq) 0.87 Sama_0968 prfC peptide chain release factor 3 (RefSeq) low > 62
Shewanella sp. ANA-3 0.25 Shewana3_3966 alpha/beta hydrolase fold (RefSeq) 0.81 Shewana3_1037 prfC peptide chain release factor 3 (RefSeq) low > 73

Not shown: 1 genomes with orthologs for CSW01_09855 only; 81 genomes with orthologs for CSW01_03470 only