Conservation of cofitness between CSW01_09950 and CSW01_02230 in Vibrio cholerae E7946 ATCC 55056

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_09950 signal peptide peptidase SppA 1.0 CSW01_02230 ribonuclease E inhibitor RraB 0.68 4
Dickeya dadantii 3937 0.46 DDA3937_RS10290 signal peptide peptidase SppA 0.47 DDA3937_RS01945 ribonuclease E inhibitor RraB low > 74
Dickeya dianthicola 67-19 0.46 HGI48_RS10300 signal peptide peptidase SppA 0.47 HGI48_RS01920 ribonuclease E inhibitor RraB low > 71
Dickeya dianthicola ME23 0.46 DZA65_RS10775 signal peptide peptidase SppA 0.47 DZA65_RS01990 ribonuclease E inhibitor RraB low > 75
Serratia liquefaciens MT49 0.45 IAI46_14325 signal peptide peptidase SppA 0.47 IAI46_02325 ribonuclease E inhibitor RraB low > 87
Klebsiella pneumoniae MKP103 0.45 KDGMDA_19255 signal peptide peptidase SppA 0.48 KDGMDA_11505 ribonuclease E inhibitor RraB low > 95
Pectobacterium carotovorum WPP14 0.44 HER17_RS11105 signal peptide peptidase SppA 0.47 HER17_RS19495 ribonuclease E inhibitor RraB low > 75
Escherichia fergusonii Becca 0.44 EFB2_02228 Protease 4 0.52 EFB2_04280 Regulator of ribonuclease activity B low > 86
Escherichia coli Nissle 1917 0.44 ECOLIN_RS09855 signal peptide peptidase SppA 0.52 ECOLIN_RS24670 ribonuclease E inhibitor RraB low > 55
Escherichia coli ECOR38 0.44 HEPCGN_05185 sppA signal peptide peptidase SppA 0.53 HEPCGN_10020 rraB ribonuclease E inhibitor RraB low > 88
Escherichia coli ECRC62 0.43 BNILDI_16110 sppA signal peptide peptidase SppA 0.53 BNILDI_07430 rraB ribonuclease E inhibitor RraB low > 75
Escherichia coli ECOR27 0.43 NOLOHH_17325 sppA signal peptide peptidase SppA 0.53 NOLOHH_04085 rraB ribonuclease E inhibitor RraB low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.43 OHPLBJKB_01966 Protease 4 0.53 OHPLBJKB_03781 Regulator of ribonuclease activity B low > 74
Enterobacter sp. TBS_079 0.43 MPMX20_01850 Protease 4 0.48 MPMX20_00557 Regulator of ribonuclease activity B low > 85
Rahnella sp. WP5 0.43 EX31_RS06305 signal peptide peptidase SppA 0.48 EX31_RS12830 ribonuclease E inhibitor RraB low > 89
Escherichia coli BW25113 0.43 b1766 sppA protease IV (signal peptide peptidase) (NCBI) 0.53 b4255 yjgD hypothetical protein (NCBI) low > 76
Escherichia coli BL21 0.43 ECD_01735 protease IV (signal peptide peptidase) 0.53 ECD_04121 protein inhibitor of RNase E low > 61
Enterobacter asburiae PDN3 0.43 EX28DRAFT_1767 signal peptide peptidase SppA, 67K type 0.48 EX28DRAFT_3462 Uncharacterized protein conserved in bacteria low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF3483 Signal peptide peptidase SppA (EC 3.4.21.-) 0.50 GFF941 Ribonuclease E inhibitor RraB low > 78
Klebsiella michiganensis M5al 0.43 BWI76_RS11585 signal peptide peptidase A 0.50 BWI76_RS03015 RNase E inhibitor protein low > 92
Shewanella sp. ANA-3 0.43 Shewana3_1964 signal peptide peptidase SppA, 67K type (RefSeq) 0.48 Shewana3_0569 hypothetical protein (RefSeq) — —
Escherichia coli ECRC101 0.42 MCAODC_18595 sppA signal peptide peptidase SppA 0.53 MCAODC_02335 rraB ribonuclease E inhibitor RraB low > 87
Escherichia coli ECRC100 0.42 OKFHMN_26815 sppA signal peptide peptidase SppA 0.53 OKFHMN_11830 rraB ribonuclease E inhibitor RraB low > 79
Escherichia coli ECRC98 0.42 JDDGAC_01390 sppA signal peptide peptidase SppA 0.53 JDDGAC_15470 rraB ribonuclease E inhibitor RraB low > 87
Escherichia coli ECRC99 0.42 KEDOAH_01295 sppA signal peptide peptidase SppA 0.53 KEDOAH_16325 rraB ribonuclease E inhibitor RraB — —
Escherichia coli ECRC102 0.42 NIAGMN_01250 sppA signal peptide peptidase SppA 0.53 NIAGMN_09680 rraB ribonuclease E inhibitor RraB low > 80
Shewanella oneidensis MR-1 0.42 SO2420 sppA signal peptide peptidase SppA, 67K type (NCBI ptt file) 0.48 SO0568 conserved hypothetical protein (NCBI ptt file) low > 76
Erwinia amylovora T8 0.42 OLJFJH_13245 signal peptide peptidase SppA 0.54 OLJFJH_07340 ribonuclease E inhibitor RraB low > 58
Pantoea agglomerans CFBP13505 P0401 0.42 PagCFBP13505_RS02805 signal peptide peptidase SppA 0.50 PagCFBP13505_RS08945 ribonuclease E inhibitor RraB 0.77 26
Pantoea sp. MT58 0.42 IAI47_08970 signal peptide peptidase SppA 0.50 IAI47_16825 ribonuclease E inhibitor RraB low > 76
Erwinia tracheiphila HP pepo 2.2 0.42 IJEDHG_22640 sppA signal peptide peptidase SppA 0.55 IJEDHG_14130 rraB ribonuclease E inhibitor RraB low > 61
Erwinia tracheiphila SCR3 0.42 LU632_RS12970 sppA signal peptide peptidase SppA 0.55 LU632_RS20905 rraB ribonuclease E inhibitor RraB low > 73
Shewanella loihica PV-4 0.41 Shew_1941 signal peptide peptidase SppA, 67K type (RefSeq) 0.48 Shew_0451 hypothetical protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.40 Sama_1723 signal peptide peptidase SppA, 67K type (RefSeq) 0.55 Sama_3138 hypothetical protein (RefSeq) low > 62

Not shown: 31 genomes with orthologs for CSW01_09950 only; 0 genomes with orthologs for CSW01_02230 only