Conservation of cofitness between CSW01_08130 and CSW01_01555 in Vibrio cholerae E7946 ATCC 55056

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08130 LysR family transcriptional regulator 1.0 CSW01_01555 ATP-dependent RNA helicase RhlB 0.58 16
Shewanella loihica PV-4 0.43 Shew_1440 LysR family transcriptional regulator (RefSeq) 0.67 Shew_0339 ATP-dependent RNA helicase RhlB (RefSeq) — —
Shewanella amazonensis SB2B 0.42 Sama_2215 LysR family transcriptional regulator (RefSeq) 0.64 Sama_3215 ATP-dependent RNA helicase RhlB (RefSeq) low > 62
Shewanella sp. ANA-3 0.42 Shewana3_1691 LysR family transcriptional regulator (RefSeq) 0.65 Shewana3_0410 ATP-dependent RNA helicase RhlB (RefSeq) low > 73
Shewanella oneidensis MR-1 0.41 SO1916 transcriptional regulator, LysR family (NCBI ptt file) 0.66 SO0407 ATP-dependent RNA helicase, DEAD box family (NCBI ptt file) low > 76
Pseudomonas putida KT2440 0.29 PP_3366 Transcriptional regulator, LysR family 0.35 PP_1295 ATP-dependent RNA helicase RhlB low > 96
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF11 Transcriptional regulator, lysR family 0.72 GFF2892 ATP-dependent RNA helicase RhlB — —
Klebsiella pneumoniae MKP103 0.25 KDGMDA_27335 transcriptional regulator CynR 0.72 KDGMDA_09545 ATP-dependent RNA helicase RhlB low > 95
Escherichia coli ECRC99 0.24 KEDOAH_19125 cynR transcriptional regulator CynR 0.72 KEDOAH_13550 rhlB ATP-dependent RNA helicase RhlB — —
Escherichia coli ECRC98 0.24 JDDGAC_12495 cynR transcriptional regulator CynR 0.72 JDDGAC_18220 rhlB ATP-dependent RNA helicase RhlB low > 87
Escherichia coli ECRC102 0.24 NIAGMN_06895 cynR transcriptional regulator CynR 0.72 NIAGMN_12355 rhlB ATP-dependent RNA helicase RhlB low > 80
Escherichia coli ECRC101 0.24 MCAODC_28070 cynR transcriptional regulator CynR 0.72 MCAODC_05105 rhlB ATP-dependent RNA helicase RhlB low > 87
Escherichia coli ECRC100 0.24 OKFHMN_08840 cynR transcriptional regulator CynR 0.72 OKFHMN_14600 rhlB ATP-dependent RNA helicase RhlB low > 79
Escherichia coli BW25113 0.24 b0338 cynR DNA-binding transcriptional dual regulator (NCBI) 0.72 b3780 rhlB ATP-dependent RNA helicase (NCBI) low > 76
Escherichia coli BL21 0.24 ECD_00292 transcriptional activator of cyn operon; autorepressor 0.72 ECD_03658 ATP-dependent RNA helicase low > 61
Escherichia coli ECOR38 0.24 HEPCGN_07455 cynR transcriptional regulator CynR 0.72 HEPCGN_13310 rhlB ATP-dependent RNA helicase RhlB 0.36 40
Escherichia coli ECRC62 0.23 BNILDI_23155 cynR transcriptional regulator CynR 0.72 BNILDI_04790 rhlB ATP-dependent RNA helicase RhlB 0.64 11
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_03333 HTH-type transcriptional regulator CynR 0.72 OHPLBJKB_04274 ATP-dependent RNA helicase RhlB low > 74
Serratia liquefaciens MT49 0.23 IAI46_07810 transcriptional regulator CynR 0.71 IAI46_00575 ATP-dependent RNA helicase RhlB low > 87
Escherichia coli ECOR27 0.23 NOLOHH_01740 cynR transcriptional regulator CynR 0.72 NOLOHH_06735 rhlB ATP-dependent RNA helicase RhlB low > 76
Pseudomonas fluorescens FW300-N1B4 0.22 Pf1N1B4_4442 Cyn operon transcriptional activator 0.35 Pf1N1B4_920 ATP-dependent RNA helicase RhlB low > 87
Klebsiella michiganensis M5al 0.22 BWI76_RS04365 LysR family transcriptional regulator 0.71 BWI76_RS01065 ATP-dependent RNA helicase RhlB low > 92
Escherichia fergusonii Becca 0.21 EFB2_03338 Hydrogen peroxide-inducible genes activator 0.72 EFB2_04858 ATP-dependent RNA helicase RhlB low > 86
Escherichia coli Nissle 1917 0.21 ECOLIN_RS04090 LysR family transcriptional regulator 0.72 ECOLIN_RS21700 ATP-dependent RNA helicase RhlB — —
Enterobacter sp. TBS_079 0.20 MPMX20_03081 Hydrogen peroxide-inducible genes activator 0.71 MPMX20_04492 ATP-dependent RNA helicase RhlB low > 85
Dickeya dadantii 3937 0.20 DDA3937_RS07805 LysR family transcriptional regulator 0.70 DDA3937_RS20080 ATP-dependent RNA helicase RhlB low > 74
Acinetobacter baumannii LAC-4 0.20 RR41_RS03790 LysR family transcriptional regulator 0.37 RR41_RS06305 ATP-dependent RNA helicase RhlB low > 55

Not shown: 30 genomes with orthologs for CSW01_08130 only; 17 genomes with orthologs for CSW01_01555 only