Conservation of cofitness between CSW01_01485 and CSW01_01555 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01485 transcriptional regulator 1.0 CSW01_01555 ATP-dependent RNA helicase RhlB 0.93 16
Erwinia amylovora T8 0.56 OLJFJH_04280 gluconate operon transcriptional repressor GntR 0.71 OLJFJH_06265 ATP-dependent RNA helicase RhlB low > 58
Dickeya dadantii 3937 0.55 DDA3937_RS19785 gluconate operon transcriptional repressor GntR 0.70 DDA3937_RS20080 ATP-dependent RNA helicase RhlB low > 74
Dickeya dianthicola ME23 0.55 DZA65_RS20970 gluconate operon transcriptional repressor GntR 0.70 DZA65_RS21270 ATP-dependent RNA helicase RhlB low > 75
Dickeya dianthicola 67-19 0.55 HGI48_RS19900 gluconate operon transcriptional repressor GntR 0.70 HGI48_RS20225 ATP-dependent RNA helicase RhlB low > 71
Rahnella sp. WP5 0.54 EX31_RS05060 gluconate operon transcriptional repressor GntR 0.71 EX31_RS15040 ATP-dependent RNA helicase RhlB low > 89
Erwinia tracheiphila HP pepo 2.2 0.54 IJEDHG_08040 gntR gluconate operon transcriptional repressor GntR 0.71 IJEDHG_08915 rhlB ATP-dependent RNA helicase RhlB — —
Serratia liquefaciens MT49 0.54 IAI46_23965 gluconate operon transcriptional repressor GntR 0.71 IAI46_00575 ATP-dependent RNA helicase RhlB low > 86
Erwinia tracheiphila SCR3 0.53 LU632_RS19160 gntR gluconate operon transcriptional repressor GntR 0.71 LU632_RS24265 rhlB ATP-dependent RNA helicase RhlB low > 74
Escherichia coli ECRC102 0.52 NIAGMN_14605 gntR gluconate operon transcriptional repressor GntR 0.72 NIAGMN_12355 rhlB ATP-dependent RNA helicase RhlB low > 80
Escherichia coli Nissle 1917 0.52 ECOLIN_RS19675 gluconate operon transcriptional repressor GntR 0.72 ECOLIN_RS21700 ATP-dependent RNA helicase RhlB low > 55
Escherichia coli ECRC99 0.52 KEDOAH_11305 gntR gluconate operon transcriptional repressor GntR 0.72 KEDOAH_13550 rhlB ATP-dependent RNA helicase RhlB — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.52 OHPLBJKB_00264 HTH-type transcriptional regulator GntR 0.72 OHPLBJKB_04274 ATP-dependent RNA helicase RhlB low > 74
Pectobacterium carotovorum WPP14 0.52 HER17_RS01450 gluconate operon transcriptional repressor GntR 0.71 HER17_RS01130 ATP-dependent RNA helicase RhlB low > 75
Escherichia coli ECRC100 0.52 OKFHMN_16835 gntR gluconate operon transcriptional repressor GntR 0.72 OKFHMN_14600 rhlB ATP-dependent RNA helicase RhlB low > 79
Escherichia coli BW25113 0.52 b3438 gntR DNA-binding transcriptional repressor (NCBI) 0.72 b3780 rhlB ATP-dependent RNA helicase (NCBI) low > 76
Escherichia coli ECRC101 0.52 MCAODC_07365 gntR gluconate operon transcriptional repressor GntR 0.72 MCAODC_05105 rhlB ATP-dependent RNA helicase RhlB low > 88
Escherichia coli ECRC62 0.52 BNILDI_02870 gntR gluconate operon transcriptional repressor GntR 0.72 BNILDI_04790 rhlB ATP-dependent RNA helicase RhlB low > 75
Pantoea sp. MT58 0.52 IAI47_01650 gluconate operon transcriptional repressor GntR 0.73 IAI47_18535 ATP-dependent RNA helicase RhlB low > 76
Escherichia coli ECRC98 0.52 JDDGAC_20465 gntR gluconate operon transcriptional repressor GntR 0.72 JDDGAC_18220 rhlB ATP-dependent RNA helicase RhlB low > 87
Escherichia coli ECOR38 0.52 HEPCGN_15660 gntR gluconate operon transcriptional repressor GntR 0.72 HEPCGN_13310 rhlB ATP-dependent RNA helicase RhlB 0.34 80
Escherichia fergusonii Becca 0.52 EFB2_00382 HTH-type transcriptional regulator GntR 0.72 EFB2_04858 ATP-dependent RNA helicase RhlB low > 86
Enterobacter sp. TBS_079 0.52 MPMX20_04319 HTH-type transcriptional regulator GntR 0.71 MPMX20_04492 ATP-dependent RNA helicase RhlB low > 85
Klebsiella pneumoniae MKP103 0.51 KDGMDA_07120 gluconate operon transcriptional repressor GntR 0.72 KDGMDA_09545 ATP-dependent RNA helicase RhlB low > 95
Escherichia coli BL21 0.51 ECD_03289 d-gluconate inducible gluconate regulon transcriptional repressor 0.72 ECD_03658 ATP-dependent RNA helicase low > 61
Escherichia coli ECOR27 0.51 NOLOHH_08635 gntR gluconate operon transcriptional repressor GntR 0.72 NOLOHH_06735 rhlB ATP-dependent RNA helicase RhlB low > 76
Klebsiella michiganensis M5al 0.51 BWI76_RS26245 transcriptional regulator 0.71 BWI76_RS01065 ATP-dependent RNA helicase RhlB low > 92
Enterobacter asburiae PDN3 0.51 EX28DRAFT_4274 transcriptional regulator, LacI family 0.72 EX28DRAFT_4451 Superfamily II DNA and RNA helicases low > 76
Pantoea agglomerans CFBP13505 P0401 0.50 PagCFBP13505_RS18155 gluconate operon transcriptional repressor GntR 0.73 PagCFBP13505_RS15530 ATP-dependent RNA helicase RhlB low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF570 Gluconate utilization system Gnt-I transcriptional repressor 0.72 GFF2892 ATP-dependent RNA helicase RhlB low > 78
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_558 Gluconate utilization system Gnt-I transcriptional repressor 0.35 Pf1N1B4_920 ATP-dependent RNA helicase RhlB low > 87
Pseudomonas stutzeri RCH2 0.34 Psest_2126 Transcriptional regulators 0.36 Psest_3166 Superfamily II DNA and RNA helicases low > 67
Pseudomonas sp. SVBP6 0.34 COO64_RS25590 LacI family DNA-binding transcriptional regulator 0.36 COO64_RS11685 rhlB ATP-dependent RNA helicase RhlB low > 93
Alteromonas macleodii MIT1002 0.31 MIT1002_03475 Gluconate utilization system GNT-I transcriptional repressor 0.60 MIT1002_00515 ATP-dependent RNA helicase RhlB 0.61 42
Pseudomonas putida KT2440 0.31 PP_3415 Transcriptional regulator, LacI family 0.35 PP_1295 ATP-dependent RNA helicase RhlB low > 96

Not shown: 38 genomes with orthologs for CSW01_01485 only; 9 genomes with orthologs for CSW01_01555 only