Conservation of cofitness between CSW01_10360 and CSW01_01245 in Vibrio cholerae E7946 ATCC 55056

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10360 peptidase M16 1.0 CSW01_01245 lipopolysaccharide heptosyltransferase II 0.88 11
Pectobacterium carotovorum WPP14 0.20 HER17_RS16530 pitrilysin 0.51 HER17_RS20775 ADP-heptose--LPS heptosyltransferase RfaF low > 75
Dickeya dianthicola ME23 0.19 DZA65_RS05335 pitrilysin 0.49 DZA65_RS00820 ADP-heptose--LPS heptosyltransferase RfaF — —
Dickeya dianthicola 67-19 0.19 HGI48_RS04995 pitrilysin 0.49 HGI48_RS00765 ADP-heptose--LPS heptosyltransferase RfaF — —
Dickeya dadantii 3937 0.19 DDA3937_RS04985 pitrilysin 0.50 DDA3937_RS20445 ADP-heptose--LPS heptosyltransferase RfaF — —
Serratia liquefaciens MT49 0.19 IAI46_20410 pitrilysin 0.49 IAI46_24740 ADP-heptose--LPS heptosyltransferase RfaF — —
Erwinia tracheiphila SCR3 0.18 LU632_RS06185 ptrA pitrilysin 0.48 LU632_RS21920 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.18 GFF1302 Protease III precursor (EC 3.4.24.55) 0.50 GFF391 ADP-heptose--lipooligosaccharide heptosyltransferase II (EC 2.4.1.-) low > 78
Pantoea sp. MT58 0.17 IAI47_03960 pitrilysin 0.48 IAI47_00685 ADP-heptose--LPS heptosyltransferase RfaF — —
Enterobacter sp. TBS_079 0.17 MPMX20_03684 Protease 3 0.49 MPMX20_00113 ADP-heptose--LPS heptosyltransferase 2 — —
Rahnella sp. WP5 0.17 EX31_RS13165 pitrilysin 0.50 EX31_RS14400 ADP-heptose--LPS heptosyltransferase RfaF 0.44 4
Enterobacter asburiae PDN3 0.17 EX28DRAFT_2896 Secreted/periplasmic Zn-dependent peptidases, insulinase-like 0.50 EX28DRAFT_3872 lipopolysaccharide heptosyltransferase II — —
Erwinia amylovora T8 0.17 OLJFJH_09095 pitrilysin 0.49 OLJFJH_05880 ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.17 OHPLBJKB_00909 Protease 3 0.50 OHPLBJKB_00080 ADP-heptose--LPS heptosyltransferase 2 — —
Escherichia coli ECRC62 0.17 BNILDI_10410 ptrA pitrilysin 0.50 BNILDI_03935 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 75
Escherichia coli BW25113 0.17 b2821 ptr protease III (NCBI) 0.50 b3620 rfaF ADP-heptose:LPS heptosyltransferase II (NCBI) 0.23 24
Escherichia coli ECOR27 0.17 NOLOHH_11930 ptrA pitrilysin 0.50 NOLOHH_07575 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 75
Escherichia coli BL21 0.17 ECD_02669 protease III 0.50 ECD_03477 ADP-heptose:LPS heptosyltransferase II — —
Escherichia coli ECRC99 0.17 KEDOAH_08085 ptrA pitrilysin 0.50 KEDOAH_12455 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli ECRC102 0.17 NIAGMN_17815 ptrA pitrilysin 0.50 NIAGMN_13455 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli ECRC101 0.17 MCAODC_10570 ptrA pitrilysin 0.50 MCAODC_06205 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli ECRC98 0.17 JDDGAC_23710 ptrA pitrilysin 0.50 JDDGAC_19320 rfaF ADP-heptose--LPS heptosyltransferase RfaF — —
Escherichia coli ECRC100 0.17 OKFHMN_20045 ptrA pitrilysin 0.50 OKFHMN_15695 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 80
Escherichia coli Nissle 1917 0.17 ECOLIN_RS15835 pitrilysin 0.50 ECOLIN_RS20650 ADP-heptose--LPS heptosyltransferase RfaF low > 55
Escherichia fergusonii Becca 0.17 EFB2_01063 Protease 3 0.50 EFB2_00191 ADP-heptose--LPS heptosyltransferase 2 — —
Klebsiella michiganensis M5al 0.17 BWI76_RS23235 pitrilysin 0.49 BWI76_RS27265 ADP-heptose--LPS heptosyltransferase II — —
Escherichia coli ECOR38 0.17 HEPCGN_19300 ptrA pitrilysin 0.50 HEPCGN_14540 rfaF ADP-heptose--LPS heptosyltransferase RfaF low > 87
Pseudomonas fluorescens FW300-N2C3 0.08 AO356_14220 pyrroloquinoline quinone biosynthesis protein PqqF 0.53 AO356_08950 ADP-heptose--LPS heptosyltransferase — —
Pseudomonas aeruginosa PA14 0.06 IKLFDK_09635 pyrroloquinoline quinone biosynthesis protein PqqF 0.51 IKLFDK_28475 heptosyltransferase I — —

Not shown: 6 genomes with orthologs for CSW01_10360 only; 41 genomes with orthologs for CSW01_01245 only