Conservation of cofitness between CSW01_14815 and CSW01_00835 in Vibrio cholerae E7946 ATCC 55056

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_14815 hypothetical protein 1.0 CSW01_00835 HTH-type transcriptional activator IlvY 0.54 4
Serratia liquefaciens MT49 0.68 IAI46_18425 DUF3820 family protein 0.48 IAI46_24330 HTH-type transcriptional activator IlvY low > 87
Pectobacterium carotovorum WPP14 0.65 HER17_RS04050 DUF3820 family protein 0.45 HER17_RS01095 HTH-type transcriptional activator IlvY low > 75
Erwinia amylovora T8 0.64 OLJFJH_10885 cytoplasmic protein 0.46 OLJFJH_06240 HTH-type transcriptional activator IlvY low > 58
Pantoea agglomerans CFBP13505 P0401 0.63 PagCFBP13516_RS05755 DUF3820 family protein 0.46 PagCFBP13516_RS01040 ilvY HTH-type transcriptional activator IlvY low > 80
Pantoea sp. MT58 0.63 IAI47_05460 DUF3820 family protein 0.46 IAI47_01045 HTH-type transcriptional activator IlvY low > 76
Rahnella sp. WP5 0.63 EX31_RS20155 DUF3820 family protein 0.47 EX31_RS15015 HTH-type transcriptional activator IlvY low > 89
Dickeya dadantii 3937 0.63 DDA3937_RS17090 DUF3820 family protein 0.46 DDA3937_RS20135 HTH-type transcriptional activator IlvY low > 74
Dickeya dianthicola 67-19 0.61 HGI48_RS17140 DUF3820 family protein 0.47 HGI48_RS20275 HTH-type transcriptional activator IlvY low > 71
Enterobacter sp. TBS_079 0.61 MPMX20_03304 hypothetical protein 0.44 MPMX20_04497 HTH-type transcriptional regulator GltC low > 85
Dickeya dianthicola ME23 0.61 DZA65_RS18225 hypothetical protein 0.46 DZA65_RS21315 HTH-type transcriptional activator IlvY low > 75
Escherichia fergusonii Becca 0.59 EFB2_01466 hypothetical protein 0.44 EFB2_04863 HTH-type transcriptional regulator HdfR low > 86
Klebsiella michiganensis M5al 0.59 BWI76_RS20620 negative regulator 0.43 BWI76_RS00985 transcriptional regulator IlvY — —
Klebsiella pneumoniae MKP103 0.59 KDGMDA_27465 Putative quorum-sensing-regulated virulence factor 0.43 KDGMDA_09500 HTH-type transcriptional activator IlvY low > 94
Klebsiella pneumoniae MRSN742743 0.59 GJGHJB_01409 Cytoplasmic protein 0.43 GJGHJB_04866 ilvY HTH-type transcriptional activator IlvY low > 83
Escherichia coli ECRC101 0.58 MCAODC_12750 ypeB Uncharacterized protein YpeB 0.44 MCAODC_05135 ilvY HTH-type transcriptional activator IlvY low > 87
Escherichia coli ECRC62 0.58 BNILDI_12765 ypeB Uncharacterized protein YpeB 0.44 BNILDI_04760 ilvY HTH-type transcriptional activator IlvY low > 75
Escherichia coli BW25113 0.58 b4546 ypeB hypothetical protein (NCBI) 0.44 b3773 ilvY DNA-binding transcriptional dual regulator (NCBI) low > 76
Escherichia coli BL21 0.58 ECD_02310 DUF3820 family protein 0.44 ECD_03651 transcriptional activator of ilvC; autorepressor low > 61
Escherichia coli ECRC102 0.58 NIAGMN_19990 ypeB Uncharacterized protein YpeB 0.44 NIAGMN_12385 ilvY HTH-type transcriptional activator IlvY low > 80
Escherichia coli ECOR27 0.58 NOLOHH_13900 ypeB Uncharacterized protein YpeB 0.44 NOLOHH_06765 ilvY HTH-type transcriptional activator IlvY low > 75
Escherichia coli ECOR38 0.58 HEPCGN_21400 Putative quorum-sensing-regulated virulence factor 0.44 HEPCGN_13340 ilvY HTH-type transcriptional activator IlvY low > 88
Escherichia coli ECRC100 0.58 OKFHMN_22220 ypeB Uncharacterized protein YpeB 0.44 OKFHMN_14630 ilvY HTH-type transcriptional activator IlvY low > 79
Escherichia coli ECRC98 0.58 JDDGAC_26170 ypeB Uncharacterized protein YpeB 0.44 JDDGAC_18250 ilvY HTH-type transcriptional activator IlvY low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.58 OHPLBJKB_01313 hypothetical protein 0.44 OHPLBJKB_04280 HTH-type transcriptional regulator GltC low > 74
Escherichia coli ECRC99 0.58 KEDOAH_06000 ypeB Uncharacterized protein YpeB 0.44 KEDOAH_13520 ilvY HTH-type transcriptional activator IlvY — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF2040 FIG074102: hypothetical protein 0.43 GFF2897 HTH-type transcriptional regulator IlvY low > 78
Shewanella oneidensis MR-1 0.57 SO3326 conserved hypothetical protein (NCBI ptt file) 0.51 SO4350 ilvY transcriptional regulator ilvY (NCBI ptt file) low > 76
Enterobacter asburiae PDN3 0.57 EX28DRAFT_0218 Uncharacterized protein conserved in bacteria 0.44 EX28DRAFT_4445 Transcriptional regulator low > 76
Escherichia coli Nissle 1917 0.57 ECOLIN_RS13850 DUF3820 family protein 0.44 ECOLIN_RS21675 HTH-type transcriptional activator IlvY — —
Alteromonas macleodii MIT1002 0.57 MIT1002_01393 hypothetical protein 0.41 MIT1002_04044 HTH-type transcriptional regulator GltC low > 70
Shewanella sp. ANA-3 0.56 Shewana3_1217 hypothetical protein (RefSeq) 0.51 Shewana3_0354 DNA-binding transcriptional regulator IlvY (RefSeq) low > 73
Shewanella loihica PV-4 0.55 Shew_1282 hypothetical protein (RefSeq) 0.45 Shew_0287 DNA-binding transcriptional regulator IlvY (RefSeq) low > 60
Pseudomonas sp. S08-1 0.49 OH686_18670 Uncharacterized protein YpeB 0.40 OH686_08120 Transcriptional regulator IlvY, LysR family low > 80
Pseudomonas segetis P6 0.48 ACVTMO_RS11425 DUF3820 family protein 0.38 ACVTMO_RS06330 ilvY HTH-type transcriptional activator IlvY low > 75

Not shown: 29 genomes with orthologs for CSW01_14815 only; 3 genomes with orthologs for CSW01_00835 only