Conservation of cofitness between CSW01_03830 and CSW01_00685 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03830 isocitrate lyase 1.0 CSW01_00685 lysophospholipase 0.52 9
Shewanella amazonensis SB2B 0.87 Sama_2380 Isocitrate lyase (EC 4.1.3.1) (from data) 0.31 Sama_0083 alpha/beta hydrolase fold (RefSeq) low > 62
Shewanella oneidensis MR-1 0.86 SO1484 aceA Isocitrate lyase (EC 4.1.3.1) (from data) 0.32 SO4733 lypA lysophospholipase L2 (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.86 Shewana3_2942 isocitrate lyase (RefSeq) 0.33 Shewana3_4119 alpha/beta hydrolase fold (RefSeq) low > 73
Shewanella loihica PV-4 0.85 Shew_1276 Isocitrate lyase (EC 4.1.3.1) (from data) 0.33 Shew_3723 alpha/beta hydrolase fold (RefSeq) low > 60
Klebsiella pneumoniae MKP103 0.80 KDGMDA_10150 isocitrate lyase 0.29 KDGMDA_09755 lysophospholipase L2 low > 94
Klebsiella pneumoniae MRSN742743 0.80 GJGHJB_04736 aceA isocitrate lyase 0.29 GJGHJB_04815 pldB lysophospholipase L2 low > 83
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF1352 Isocitrate lyase (EC 4.1.3.1) 0.29 GFF251 Lysophospholipase L2 (EC 3.1.1.5) low > 78
Enterobacter sp. TBS_079 0.79 MPMX20_00232 Isocitrate lyase 0.28 MPMX20_04455 Lysophospholipase L2 low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_04035 Isocitrate lyase 0.30 OHPLBJKB_04226 Lysophospholipase L2 low > 74
Escherichia coli BW25113 0.79 b4015 aceA isocitrate lyase (NCBI) 0.30 b3825 pldB lysophospholipase L(2) (NCBI) low > 76
Escherichia coli ECOR27 0.79 NOLOHH_05410 aceA isocitrate lyase 0.30 NOLOHH_06475 pldB lysophospholipase L2 low > 75
Escherichia coli ECOR38 0.79 HEPCGN_11905 aceA isocitrate lyase 0.30 HEPCGN_13045 pldB lysophospholipase L2 low > 88
Escherichia coli ECRC62 0.79 BNILDI_06110 aceA isocitrate lyase 0.30 BNILDI_05055 pldB lysophospholipase L2 low > 75
Escherichia coli BL21 0.79 ECD_03887 isocitrate lyase 0.30 ECD_03704 lysophospholipase L2 low > 61
Escherichia coli ECRC102 0.79 NIAGMN_11015 aceA isocitrate lyase 0.30 NIAGMN_12100 pldB lysophospholipase L2 low > 80
Enterobacter asburiae PDN3 0.79 EX28DRAFT_4329 isocitrate lyase 0.27 EX28DRAFT_4490 Lysophospholipase low > 76
Escherichia coli ECRC101 0.79 MCAODC_03765 aceA isocitrate lyase 0.30 MCAODC_04850 pldB lysophospholipase L2 low > 87
Escherichia coli ECRC98 0.79 JDDGAC_16890 aceA isocitrate lyase 0.30 JDDGAC_17970 pldB lysophospholipase L2 low > 87
Escherichia coli ECRC100 0.79 OKFHMN_13265 aceA isocitrate lyase 0.30 OKFHMN_14345 pldB lysophospholipase L2 low > 79
Escherichia coli ECRC99 0.79 KEDOAH_14895 aceA isocitrate lyase 0.30 KEDOAH_13805 pldB lysophospholipase L2 — —
Dickeya dianthicola 67-19 0.79 HGI48_RS19145 isocitrate lyase 0.29 HGI48_RS19985 lysophospholipase L2 low > 71
Serratia liquefaciens MT49 0.79 IAI46_23190 isocitrate lyase 0.30 IAI46_00785 lysophospholipase L2 low > 87
Escherichia fergusonii Becca 0.79 EFB2_04595 Isocitrate lyase 0.30 EFB2_04812 Lysophospholipase L2 low > 86
Dickeya dianthicola ME23 0.78 DZA65_RS20265 isocitrate lyase 0.29 DZA65_RS21030 lysophospholipase L2 low > 75
Dickeya dadantii 3937 0.78 DDA3937_RS19055 isocitrate lyase 0.30 DDA3937_RS19830 lysophospholipase L2 low > 74
Klebsiella michiganensis M5al 0.78 BWI76_RS01665 Isocitrate lyase (EC 4.1.3.1) (from data) 0.30 BWI76_RS01260 lysophospholipase L2 low > 92
Rahnella sp. WP5 0.78 EX31_RS11745 isocitrate lyase 0.30 EX31_RS15225 lysophospholipase L2 low > 89
Pectobacterium carotovorum WPP14 0.78 HER17_RS02295 isocitrate lyase 0.32 HER17_RS01410 lysophospholipase L2 low > 75
Pantoea agglomerans CFBP13505 P0401 0.76 PagCFBP13516_RS18250 aceA isocitrate lyase 0.31 PagCFBP13516_RS18595 pldB lysophospholipase L2 low > 80
Pantoea sp. MT58 0.76 IAI47_18005 isocitrate lyase 0.31 IAI47_18340 lysophospholipase L2 low > 76

Not shown: 50 genomes with orthologs for CSW01_03830 only; 3 genomes with orthologs for CSW01_00685 only