Conservation of cofitness between BPHYT_RS06110 and BPHYT_RS28940 in Burkholderia phytofirmans PsJN

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS06110 3-carboxymuconate cyclase 1.0 BPHYT_RS28940 divalent ion tolerance protein CutA 0.25 19
Paraburkholderia bryophila 376MFSha3.1 0.93 H281DRAFT_00300 6-phosphogluconolactonase 0.86 H281DRAFT_01385 cellulose synthase subunit low > 103
Paraburkholderia graminis OAS925 0.91 ABIE53_001430 6-phosphogluconolactonase 0.27 ABIE53_001176 hypothetical protein low > 113
Paraburkholderia sabiae LMG 24235 0.82 QEN71_RS24525 lactonase family protein 0.62 QEN71_RS08570 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 153
Pseudomonas fluorescens SBW25 0.42 PFLU_RS17155 lactonase family protein 0.34 PFLU_RS01480 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 109
Pseudomonas fluorescens SBW25-INTG 0.42 PFLU_RS17155 lactonase family protein 0.34 PFLU_RS01480 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 109
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_3314 D-galactono-lactonase (EC 3.1.1.-) (from data) 0.35 PfGW456L13_3883 Cyclic di-GMP binding protein precursor low > 87
Pseudomonas putida KT2440 0.37 PP_2021 L-alpha-hydroxyglutaric acid gamma-lactonase 0.24 PP_2636 cellulose synthase and translocator subunit low > 96
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_4626 3-carboxymuconate cyclase 0.35 Pf1N1B4_5157 Cyclic di-GMP binding protein precursor — —
Serratia liquefaciens MT49 0.23 IAI46_22510 lactonase family protein 0.23 IAI46_00530 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 86
Enterobacter sp. TBS_079 0.22 MPMX20_00527 6-phosphogluconolactonase 0.24 MPMX20_04417 Cyclic di-GMP-binding protein low > 85
Enterobacter asburiae PDN3 0.22 EX28DRAFT_3432 3-carboxymuconate cyclase 0.24 EX28DRAFT_4045 Bacterial cellulose synthase subunit low > 76
Klebsiella michiganensis M5al 0.21 BWI76_RS02900 6-phosphogluconolactonase 0.25 BWI76_RS26780 cellulose synthase regulator BcsB low > 92
Variovorax sp. SCN45 0.18 GFF6709 Putative hemagglutinin-related protein 0.35 GFF1315 Cyclic di-GMP-binding protein BcsB low > 127
Dickeya dianthicola 67-19 0.16 HGI48_RS06675 6-phosphogluconolactonase 0.13 HGI48_RS20855 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 71
Pectobacterium carotovorum WPP14 0.15 HER17_RS14690 6-phosphogluconolactonase 0.24 HER17_RS00360 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 75
Dickeya dianthicola ME23 0.15 DZA65_RS07030 6-phosphogluconolactonase 0.13 DZA65_RS21870 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 75
Dickeya dadantii 3937 0.14 DDA3937_RS06885 lactonase family protein 0.13 DDA3937_RS00535 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 74
Pantoea sp. MT58 0.14 IAI47_13545 6-phosphogluconolactonase 0.13 IAI47_18610 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 76
Escherichia coli ECOR27 0.14 NOLOHH_23105 pgl 6-phosphogluconolactonase 0.24 NOLOHH_08140 bcsB cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 75
Escherichia coli ECRC101 0.14 MCAODC_25895 pgl 6-phosphogluconolactonase 0.24 MCAODC_06690 bcsB cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 87
Escherichia coli Nissle 1917 0.14 ECOLIN_RS04085 6-phosphogluconolactonase 0.24 ECOLIN_RS20200 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 55
Escherichia coli ECRC62 0.14 BNILDI_21100 pgl 6-phosphogluconolactonase 0.24 BNILDI_03415 bcsB cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 75
Escherichia coli BW25113 0.14 b0767 ybhE 6-phosphogluconolactonase (NCBI) 0.24 b3532 bcsB regulator of cellulose synthase, cyclic di-GMP binding (NCBI) low > 76
Escherichia coli ECRC100 0.14 OKFHMN_06675 pgl 6-phosphogluconolactonase 0.23 OKFHMN_16175 bcsB cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 80
Escherichia coli ECRC102 0.14 NIAGMN_04725 pgl 6-phosphogluconolactonase 0.24 NIAGMN_13935 bcsB cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB — —
Escherichia coli ECRC99 0.14 KEDOAH_21290 pgl 6-phosphogluconolactonase 0.24 KEDOAH_11975 bcsB cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB — —
Escherichia coli ECOR38 0.14 HEPCGN_01600 pgl 6-phosphogluconolactonase 0.24 HEPCGN_15080 bcsB cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 87
Escherichia coli ECRC98 0.13 JDDGAC_10330 pgl 6-phosphogluconolactonase 0.24 JDDGAC_19805 bcsB cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB low > 86
Escherichia fergusonii Becca 0.13 EFB2_03339 6-phosphogluconolactonase 0.24 EFB2_00276 Cyclic di-GMP-binding protein 0.58 23
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.13 GFF661 6-phosphogluconolactonase (EC 3.1.1.31) 0.24 GFF491 Cyclic di-GMP binding protein precursor low > 78

Not shown: 28 genomes with orthologs for BPHYT_RS06110 only; 5 genomes with orthologs for BPHYT_RS28940 only