Conservation of cofitness between BNILDI_11870 and BNILDI_22855 in Escherichia coli ECRC62

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_11870 rseC SoxR-reducing system protein RseC 1.0 BNILDI_22855 tgt tRNA guanosine(34) transglycosylase Tgt 0.81 18
Escherichia coli BL21 1.00 ECD_02464 SoxR iron-sulfur cluster reduction factor component 1.00 ECD_00354 tRNA-guanine transglycosylase low > 61
Escherichia coli ECRC98 1.00 JDDGAC_25060 rseC SoxR-reducing system protein RseC 1.00 JDDGAC_12160 tgt tRNA guanosine(34) transglycosylase Tgt low > 86
Escherichia coli ECRC101 1.00 MCAODC_11925 rseC SoxR-reducing system protein RseC 1.00 MCAODC_27730 tgt tRNA guanosine(34) transglycosylase Tgt low > 87
Escherichia coli ECRC100 1.00 OKFHMN_21395 rseC SoxR-reducing system protein RseC 1.00 OKFHMN_08505 tgt tRNA guanosine(34) transglycosylase Tgt 0.79 41
Escherichia coli ECRC102 1.00 NIAGMN_19165 rseC SoxR-reducing system protein RseC 1.00 NIAGMN_06560 tgt tRNA guanosine(34) transglycosylase Tgt — —
Escherichia coli ECRC99 1.00 KEDOAH_06830 rseC SoxR-reducing system protein RseC 1.00 KEDOAH_19460 tgt tRNA guanosine(34) transglycosylase Tgt — —
Escherichia coli ECOR27 1.00 NOLOHH_13070 rseC SoxR-reducing system protein RseC 1.00 NOLOHH_01440 tgt tRNA guanosine(34) transglycosylase Tgt low > 75
Escherichia coli BW25113 1.00 b2570 rseC RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) 1.00 b0406 tgt queuine tRNA-ribosyltransferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01137 Protein RseC 1.00 OHPLBJKB_03270 Queuine tRNA-ribosyltransferase low > 73
Escherichia fergusonii Becca 0.99 EFB2_01326 Protein RseC 1.00 EFB2_03651 Queuine tRNA-ribosyltransferase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14545 SoxR-reducing system protein RseC 1.00 ECOLIN_RS02445 tRNA guanosine(34) transglycosylase Tgt — —
Escherichia coli ECOR38 0.99 HEPCGN_20540 rseC SoxR-reducing system protein RseC 1.00 HEPCGN_07145 tgt tRNA guanosine(34) transglycosylase Tgt low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2110 Sigma factor RpoE regulatory protein RseC 0.98 GFF4305 tRNA-guanine transglycosylase (EC 2.4.2.29) low > 78
Klebsiella michiganensis M5al 0.77 BWI76_RS21340 SoxR reducing system protein RseC 0.98 BWI76_RS06300 tRNA guanosine(34) transglycosylase Tgt — —
Enterobacter sp. TBS_079 0.76 MPMX20_03441 Protein RseC 0.98 MPMX20_00997 Queuine tRNA-ribosyltransferase low > 85
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0075 positive regulator of sigma(E), RseC/MucC 0.98 EX28DRAFT_2565 tRNA-guanine transglycosylase low > 76
Pantoea sp. MT58 0.63 IAI47_04865 SoxR-reducing system protein RseC 0.95 IAI47_14805 tRNA guanosine(34) transglycosylase Tgt low > 76
Rahnella sp. WP5 0.57 EX31_RS21815 SoxR-reducing system protein RseC 0.91 EX31_RS22095 tRNA guanosine(34) transglycosylase Tgt low > 89
Serratia liquefaciens MT49 0.53 IAI46_19570 SoxR-reducing system protein RseC 0.91 IAI46_04840 tRNA guanosine(34) transglycosylase Tgt low > 86
Erwinia tracheiphila SCR3 0.52 LU632_RS15410 rseC SoxR-reducing system protein RseC 0.91 LU632_RS18500 tgt tRNA guanosine(34) transglycosylase Tgt — —
Pectobacterium carotovorum WPP14 0.46 HER17_RS05795 SoxR-reducing system protein RseC 0.92 HER17_RS15990 tRNA guanosine(34) transglycosylase Tgt low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS15750 SoxR-reducing system protein RseC 0.92 DDA3937_RS05470 tRNA guanosine(34) transglycosylase Tgt low > 74
Dickeya dianthicola 67-19 0.39 HGI48_RS15835 SoxR-reducing system protein RseC 0.92 HGI48_RS05530 tRNA guanosine(34) transglycosylase Tgt — —
Dickeya dianthicola ME23 0.38 DZA65_RS16915 SoxR-reducing system protein RseC 0.92 DZA65_RS05855 tRNA guanosine(34) transglycosylase Tgt — —
Shewanella oneidensis MR-1 0.22 SO1345 rseC sigma-E factor regulatory protein RseC (NCBI ptt file) 0.85 SO3113 tgt queuine tRNA-ribosyltransferase (NCBI ptt file) — —
Shewanella loihica PV-4 0.20 Shew_1051 positive regulator of sigma E, RseC/MucC (RefSeq) 0.84 Shew_2337 tgt queuine tRNA-ribosyltransferase (RefSeq) — —
Marinobacter adhaerens HP15 0.20 HP15_778 positive regulator of sigma E, RseC/MucC 0.72 HP15_1479 queuine tRNA-ribosyltransferase — —
Pseudomonas stutzeri RCH2 0.20 Psest_3097 Positive regulator of sigma E activity 0.72 Psest_1242 tRNA-guanine transglycosylase, queuosine-34-forming — —
Kangiella aquimarina DSM 16071 0.19 B158DRAFT_2182 positive regulator of sigma(E), RseC/MucC 0.72 B158DRAFT_2516 tRNA-guanine transglycosylase (EC 2.4.2.29) low > 40
Alteromonas macleodii MIT1002 0.18 MIT1002_02716 Sigma-E factor regulatory protein RseC 0.76 MIT1002_02813 Queuine tRNA-ribosyltransferase low > 70
Magnetospirillum magneticum AMB-1 0.16 AMB_RS13145 positive regulator of sigma E activity 0.52 AMB_RS03090 tRNA guanosine(34) transglycosylase Tgt low > 64

Not shown: 0 genomes with orthologs for BNILDI_11870 only; 68 genomes with orthologs for BNILDI_22855 only