Conservation of cofitness between BNILDI_09215 and BNILDI_10310 in Escherichia coli ECRC62

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_09215 rof Rho-binding antiterminator 1.0 BNILDI_10310 lysA diaminopimelate decarboxylase 0.75 7
Escherichia coli ECRC98 1.00 JDDGAC_13705 rof Rho-binding antiterminator 0.99 JDDGAC_23610 lysA diaminopimelate decarboxylase low > 86
Escherichia coli ECOR27 1.00 NOLOHH_02455 rof Rho-binding antiterminator 0.99 NOLOHH_11830 lysA diaminopimelate decarboxylase low > 75
Escherichia coli ECRC102 1.00 NIAGMN_07960 rof Rho-binding antiterminator 0.99 NIAGMN_17715 lysA diaminopimelate decarboxylase — —
Escherichia coli ECRC99 1.00 KEDOAH_18045 rof Rho-binding antiterminator 0.99 KEDOAH_08185 lysA diaminopimelate decarboxylase — —
Escherichia coli ECRC100 1.00 OKFHMN_10110 rof Rho-binding antiterminator 0.99 OKFHMN_19945 lysA diaminopimelate decarboxylase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03474 Protein rof 1.00 OHPLBJKB_00891 Diaminopimelate decarboxylase low > 73
Escherichia coli ECRC101 1.00 MCAODC_00625 rof Rho-binding antiterminator 0.99 MCAODC_10470 lysA diaminopimelate decarboxylase low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS01025 Rho-binding antiterminator 0.99 ECOLIN_RS15930 diaminopimelate decarboxylase — —
Escherichia fergusonii Becca 0.99 EFB2_03855 Protein rof 0.99 EFB2_01045 Diaminopimelate decarboxylase low > 86
Escherichia coli ECOR38 0.99 HEPCGN_08065 rof Rho-binding antiterminator 0.99 HEPCGN_19565 lysA diaminopimelate decarboxylase low > 87
Escherichia coli BL21 0.97 ECD_00187 modulator of Rho-dependent transcription termination 1.00 ECD_02686 diaminopimelate decarboxylase, PLP-binding low > 61
Escherichia coli BW25113 0.97 b0189 yaeO orf, hypothetical protein (VIMSS) 1.00 b2838 lysA diaminopimelate decarboxylase, PLP-binding (NCBI) 0.47 22
Enterobacter asburiae PDN3 0.92 EX28DRAFT_3777 transcriptional antiterminator, Rof 0.88 EX28DRAFT_2916 diaminopimelate decarboxylase low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_00873 Protein rof 0.89 MPMX20_03705 Diaminopimelate decarboxylase low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS05315 Rho-binding antiterminator 0.87 BWI76_RS23360 diaminopimelate decarboxylase low > 92
Rahnella sp. WP5 0.79 EX31_RS12930 Rho-binding antiterminator 0.75 EX31_RS13275 diaminopimelate decarboxylase low > 89
Pectobacterium carotovorum WPP14 0.75 HER17_RS16240 Rho-binding antiterminator 0.77 HER17_RS03710 diaminopimelate decarboxylase low > 75
Pantoea sp. MT58 0.74 IAI47_15425 Rho-binding antiterminator 0.74 IAI47_03860 diaminopimelate decarboxylase low > 76
Dickeya dianthicola 67-19 0.73 HGI48_RS05210 Rho-binding antiterminator 0.74 HGI48_RS17485 diaminopimelate decarboxylase low > 71
Dickeya dianthicola ME23 0.73 DZA65_RS05550 Rho-binding antiterminator 0.75 DZA65_RS18550 diaminopimelate decarboxylase low > 75
Dickeya dadantii 3937 0.73 DDA3937_RS05210 Rho-binding antiterminator 0.75 DDA3937_RS17425 diaminopimelate decarboxylase low > 74
Erwinia tracheiphila SCR3 0.70 LU632_RS19865 rof Rho-binding antiterminator 0.76 LU632_RS06040 lysA diaminopimelate decarboxylase low > 74
Serratia liquefaciens MT49 0.66 IAI46_20125 Rho-binding antiterminator 0.78 IAI46_20520 diaminopimelate decarboxylase low > 86
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_06760 transcriptional antiterminator 0.20 AO356_12740 diaminopimelate decarboxylase — —
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_3204 Rho-specific inhibitor of transcription termination (YaeO) 0.21 Pf6N2E2_4419 Diaminopimelate decarboxylase (EC 4.1.1.20) — —
Shewanella amazonensis SB2B 0.31 Sama_3316 transcriptional antiterminator, Rof (RefSeq) 0.19 Sama_3250 diaminopimelate decarboxylase (RefSeq) low > 62
Shewanella sp. ANA-3 0.31 Shewana3_3832 transcriptional antiterminator, Rof (RefSeq) 0.19 Shewana3_0390 diaminopimelate decarboxylase (RefSeq) low > 73
Pseudomonas sp. S08-1 0.31 OH686_05855 Rho-specific inhibitor of transcription termination (YaeO) 0.20 OH686_13800 diaminopimelate decarboxylase low > 80
Pseudomonas sp. RS175 0.31 PFR28_00267 Protein rof 0.22 PFR28_04375 Diaminopimelate decarboxylase — —

Not shown: 0 genomes with orthologs for BNILDI_09215 only; 70 genomes with orthologs for BNILDI_10310 only