Conservation of cofitness between BNILDI_11870 and BNILDI_05310 in Escherichia coli ECRC62

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_11870 rseC SoxR-reducing system protein RseC 1.0 BNILDI_05310 typA ribosome-dependent GTPase TypA 0.81 16
Escherichia coli ECRC102 1.00 NIAGMN_19165 rseC SoxR-reducing system protein RseC 1.00 NIAGMN_11845 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC99 1.00 KEDOAH_06830 rseC SoxR-reducing system protein RseC 1.00 KEDOAH_14060 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC101 1.00 MCAODC_11925 rseC SoxR-reducing system protein RseC 1.00 MCAODC_04590 typA ribosome-dependent GTPase TypA low > 87
Escherichia coli ECRC98 1.00 JDDGAC_25060 rseC SoxR-reducing system protein RseC 1.00 JDDGAC_17715 typA ribosome-dependent GTPase TypA low > 86
Escherichia coli ECRC100 1.00 OKFHMN_21395 rseC SoxR-reducing system protein RseC 1.00 OKFHMN_14090 typA ribosome-dependent GTPase TypA 0.82 26
Escherichia coli BL21 1.00 ECD_02464 SoxR iron-sulfur cluster reduction factor component 1.00 ECD_03756 GTP-binding protein 0.81 2
Escherichia coli ECOR27 1.00 NOLOHH_13070 rseC SoxR-reducing system protein RseC 1.00 NOLOHH_06220 typA ribosome-dependent GTPase TypA low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01137 Protein RseC 1.00 OHPLBJKB_04181 GTP-binding protein TypA/BipA 0.71 16
Escherichia coli BW25113 1.00 b2570 rseC RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) 1.00 b3871 bipA GTP-binding protein (NCBI) low > 76
Escherichia fergusonii Becca 0.99 EFB2_01326 Protein RseC 1.00 EFB2_04745 GTP-binding protein TypA/BipA 0.56 35
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14545 SoxR-reducing system protein RseC 1.00 ECOLIN_RS22315 ribosome-dependent GTPase TypA low > 55
Escherichia coli ECOR38 0.99 HEPCGN_20540 rseC SoxR-reducing system protein RseC 1.00 HEPCGN_12720 typA ribosome-dependent GTPase TypA low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2110 Sigma factor RpoE regulatory protein RseC 0.97 GFF2223 GTP-binding protein TypA/BipA low > 78
Klebsiella michiganensis M5al 0.77 BWI76_RS21340 SoxR reducing system protein RseC 0.95 BWI76_RS00410 translational GTPase TypA — —
Enterobacter sp. TBS_079 0.76 MPMX20_03441 Protein RseC 0.96 MPMX20_04594 GTP-binding protein TypA/BipA — —
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0075 positive regulator of sigma(E), RseC/MucC 0.95 EX28DRAFT_4353 GTP-binding protein TypA/BipA — —
Pantoea sp. MT58 0.63 IAI47_04865 SoxR-reducing system protein RseC 0.93 IAI47_00465 ribosome-dependent GTPase TypA low > 76
Rahnella sp. WP5 0.57 EX31_RS21815 SoxR-reducing system protein RseC 0.90 EX31_RS15865 ribosome-dependent GTPase TypA low > 89
Serratia liquefaciens MT49 0.53 IAI46_19570 SoxR-reducing system protein RseC 0.93 IAI46_24945 ribosome-dependent GTPase TypA low > 86
Erwinia tracheiphila SCR3 0.52 LU632_RS15410 rseC SoxR-reducing system protein RseC 0.91 LU632_RS22150 typA ribosome-dependent GTPase TypA — —
Pectobacterium carotovorum WPP14 0.46 HER17_RS05795 SoxR-reducing system protein RseC 0.91 HER17_RS21425 ribosome-dependent GTPase TypA low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS15750 SoxR-reducing system protein RseC 0.91 DDA3937_RS00140 ribosome-dependent GTPase TypA low > 74
Dickeya dianthicola 67-19 0.39 HGI48_RS15835 SoxR-reducing system protein RseC 0.90 HGI48_RS21220 ribosome-dependent GTPase TypA — —
Dickeya dianthicola ME23 0.38 DZA65_RS16915 SoxR-reducing system protein RseC 0.90 DZA65_RS22195 ribosome-dependent GTPase TypA — —
Shewanella oneidensis MR-1 0.22 SO1345 rseC sigma-E factor regulatory protein RseC (NCBI ptt file) 0.78 SO4408 bipA virulence regulator BipA (NCBI ptt file) — —
Shewanella loihica PV-4 0.20 Shew_1051 positive regulator of sigma E, RseC/MucC (RefSeq) 0.79 Shew_3553 GTP-binding protein TypA (RefSeq) — —
Marinobacter adhaerens HP15 0.20 HP15_778 positive regulator of sigma E, RseC/MucC 0.74 HP15_429 GTP-binding protein TypA — —
Pseudomonas stutzeri RCH2 0.20 Psest_3097 Positive regulator of sigma E activity 0.73 Psest_3926 GTP-binding protein TypA/BipA — —
Kangiella aquimarina DSM 16071 0.19 B158DRAFT_2182 positive regulator of sigma(E), RseC/MucC 0.77 B158DRAFT_0725 GTP-binding protein TypA/BipA low > 40
Alteromonas macleodii MIT1002 0.18 MIT1002_02716 Sigma-E factor regulatory protein RseC 0.77 MIT1002_03181 hypothetical protein low > 70

Not shown: 1 genomes with orthologs for BNILDI_11870 only; 70 genomes with orthologs for BNILDI_05310 only