Conservation of cofitness between BNILDI_11870 and BNILDI_04050 in Escherichia coli ECRC62

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_11870 rseC SoxR-reducing system protein RseC 1.0 BNILDI_04050 yicC UPF0701 protein YicC 0.85 5
Escherichia coli ECRC101 1.00 MCAODC_11925 rseC SoxR-reducing system protein RseC 1.00 MCAODC_06095 yicC UPF0701 protein YicC low > 87
Escherichia coli ECRC102 1.00 NIAGMN_19165 rseC SoxR-reducing system protein RseC 1.00 NIAGMN_13345 yicC UPF0701 protein YicC — —
Escherichia coli ECRC99 1.00 KEDOAH_06830 rseC SoxR-reducing system protein RseC 1.00 KEDOAH_12560 yicC UPF0701 protein YicC — —
Escherichia coli ECRC100 1.00 OKFHMN_21395 rseC SoxR-reducing system protein RseC 1.00 OKFHMN_15585 yicC UPF0701 protein YicC low > 80
Escherichia coli ECRC98 1.00 JDDGAC_25060 rseC SoxR-reducing system protein RseC 0.99 JDDGAC_19210 yicC UPF0701 protein YicC 0.94 26
Escherichia coli BL21 1.00 ECD_02464 SoxR iron-sulfur cluster reduction factor component 1.00 ECD_03501 UPF0701 family protein low > 61
Escherichia coli BW25113 1.00 b2570 rseC RseC protein involved in reduction of the SoxR iron-sulfur cluster (NCBI) 1.00 b3644 yicC hypothetical protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01137 Protein RseC 1.00 OHPLBJKB_00058 hypothetical protein low > 73
Escherichia coli ECOR27 1.00 NOLOHH_13070 rseC SoxR-reducing system protein RseC 1.00 NOLOHH_07465 yicC UPF0701 protein YicC low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14545 SoxR-reducing system protein RseC 0.99 ECOLIN_RS20760 YicC/YloC family endoribonuclease low > 55
Escherichia fergusonii Becca 0.99 EFB2_01326 Protein RseC 0.99 EFB2_00169 hypothetical protein low > 86
Escherichia coli ECOR38 0.99 HEPCGN_20540 rseC SoxR-reducing system protein RseC 1.00 HEPCGN_14405 yicC UPF0701 protein YicC low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.84 GFF2110 Sigma factor RpoE regulatory protein RseC 0.94 GFF365 Protein YicC 0.74 22
Klebsiella michiganensis M5al 0.77 BWI76_RS21340 SoxR reducing system protein RseC 0.94 BWI76_RS27395 hypothetical protein low > 92
Enterobacter sp. TBS_079 0.76 MPMX20_03441 Protein RseC 0.94 MPMX20_00091 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0075 positive regulator of sigma(E), RseC/MucC 0.91 EX28DRAFT_3894 TIGR00255 family protein 0.63 76
Pantoea sp. MT58 0.63 IAI47_04865 SoxR-reducing system protein RseC 0.87 IAI47_00580 YicC family protein low > 76
Rahnella sp. WP5 0.57 EX31_RS21815 SoxR-reducing system protein RseC 0.83 EX31_RS14510 YicC family protein low > 89
Serratia liquefaciens MT49 0.53 IAI46_19570 SoxR-reducing system protein RseC 0.90 IAI46_24855 YicC family protein 0.59 3
Erwinia tracheiphila SCR3 0.52 LU632_RS15410 rseC SoxR-reducing system protein RseC 0.81 LU632_RS22050 YicC family protein — —
Pectobacterium carotovorum WPP14 0.46 HER17_RS05795 SoxR-reducing system protein RseC 0.87 HER17_RS20905 YicC family protein low > 75
Dickeya dadantii 3937 0.40 DDA3937_RS15750 SoxR-reducing system protein RseC 0.86 DDA3937_RS20645 YicC family protein low > 74
Dickeya dianthicola 67-19 0.39 HGI48_RS15835 SoxR-reducing system protein RseC 0.85 HGI48_RS00540 YicC family protein — —
Dickeya dianthicola ME23 0.38 DZA65_RS16915 SoxR-reducing system protein RseC 0.86 DZA65_RS00575 YicC family protein — —
Shewanella oneidensis MR-1 0.22 SO1345 rseC sigma-E factor regulatory protein RseC (NCBI ptt file) 0.64 SO4257 conserved hypothetical protein TIGR00255 (NCBI ptt file) — —
Shewanella loihica PV-4 0.20 Shew_1051 positive regulator of sigma E, RseC/MucC (RefSeq) 0.66 Shew_3489 hypothetical protein (RefSeq) — —
Marinobacter adhaerens HP15 0.20 HP15_778 positive regulator of sigma E, RseC/MucC 0.47 HP15_301 conserved hypothetical protein — —
Pseudomonas stutzeri RCH2 0.20 Psest_3097 Positive regulator of sigma E activity 0.44 Psest_3814 TIGR00255 family protein — —
Kangiella aquimarina DSM 16071 0.19 B158DRAFT_2182 positive regulator of sigma(E), RseC/MucC 0.54 B158DRAFT_0582 TIGR00255 family protein low > 40
Alteromonas macleodii MIT1002 0.18 MIT1002_02716 Sigma-E factor regulatory protein RseC 0.69 MIT1002_04072 hypothetical protein low > 70
Magnetospirillum magneticum AMB-1 0.16 AMB_RS13145 positive regulator of sigma E activity 0.28 AMB_RS03835 YicC family protein low > 64

Not shown: 0 genomes with orthologs for BNILDI_11870 only; 65 genomes with orthologs for BNILDI_04050 only