Conservation of cofitness between Atu3296 and Atu4089 in Agrobacterium fabrum C58

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3296 two component response regulator for C4-dicarboxylate transport 1.0 Atu4089 ABC transporter permease 0.25 19
Rhizobium sp. OAE497 0.67 ABIE40_RS26335 sigma-54 dependent transcriptional regulator 0.45 ABIE40_RS20480 thiol reductant ABC exporter subunit CydD low > 107
Castellaniella sp019104865 MT123 0.55 ABCV34_RS02725 sigma-54 dependent transcriptional regulator 0.30 ABCV34_RS14385 thiol reductant ABC exporter subunit CydD low > 48
Marinobacter adhaerens HP15 0.49 HP15_725 two component, sigma54 specific, transcriptional regulator, Fis family 0.25 HP15_1748 cysteine/glutathione ABC transporter membrane/ATP-binding component low > 73
Shewanella amazonensis SB2B 0.46 Sama_2213 response regulator receiver protein (RefSeq) 0.27 Sama_2679 cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq) low > 62
Sphingomonas koreensis DSMZ 15582 0.46 Ga0059261_0619 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 0.20 Ga0059261_3825 thiol reductant ABC exporter, CydD subunit low > 68
Shewanella loihica PV-4 0.45 Shew_1442 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) 0.26 Shew_0613 cysteine/glutathione ABC transporter membrane/ATP-binding component (RefSeq) low > 60
Variovorax sp. SCN45 0.42 GFF1691 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake 0.46 GFF2655 Efflux ABC transporter for glutathione/L-cysteine, essential for assembly of bd-type respiratory oxidases => CydD subunit low > 127
Sphingobium sp. HT1-2 0.38 GFF159 hypothetical protein 0.17 GFF1746 Efflux ABC transporter for glutathione/L-cysteine, essential for assembly of bd-type respiratory oxidases => CydD subunit low > 95
Klebsiella michiganensis M5al 0.35 BWI76_RS21250 two-component system response regulator GlrR 0.24 BWI76_RS09640 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD low > 92
Klebsiella pneumoniae MKP103 0.34 KDGMDA_28370 two-component system response regulator QseF/GlrR 0.24 KDGMDA_17880 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF2455 Putative sensory histidine kinase YfhA 0.24 GFF4891 Transport ATP-binding protein CydD low > 78
Erwinia tracheiphila HP pepo 2.2 0.34 IJEDHG_02930 qseF two-component system response regulator QseF/GlrR 0.21 IJEDHG_20205 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
Pectobacterium carotovorum WPP14 0.34 HER17_RS05925 two-component system response regulator GlrR 0.25 HER17_RS12370 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD low > 75
Serratia liquefaciens MT49 0.34 IAI46_19460 two-component system response regulator GlrR 0.26 IAI46_08535 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD low > 87
Erwinia amylovora T8 0.34 OLJFJH_10330 two-component system response regulator QseF/GlrR 0.24 OLJFJH_16195 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD low > 58
Erwinia tracheiphila SCR3 0.34 LU632_RS17930 glrR two-component system response regulator GlrR 0.21 LU632_RS09725 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
Pantoea agglomerans CFBP13505 P0401 0.33 PagCFBP13505_RS14835 two-component system response regulator GlrR 0.23 PagCFBP13505_RS04405 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD low > 74
Escherichia coli ECRC62 0.33 BNILDI_11970 qseF two-component system response regulator QseF/GlrR 0.24 BNILDI_20410 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
Escherichia coli ECOR27 0.33 NOLOHH_13170 qseF two-component system response regulator QseF/GlrR 0.24 NOLOHH_22155 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
Pantoea sp. MT58 0.33 IAI47_04945 two-component system response regulator GlrR 0.22 IAI47_12925 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD low > 76
Enterobacter sp. TBS_079 0.33 MPMX20_03423 Transcriptional regulatory protein QseF 0.27 MPMX20_01549 ATP-binding/permease protein CydD low > 85
Escherichia coli ECRC101 0.33 MCAODC_12025 qseF two-component system response regulator QseF/GlrR 0.24 MCAODC_24975 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
Escherichia coli ECRC99 0.33 KEDOAH_06725 qseF two-component system response regulator QseF/GlrR 0.24 KEDOAH_22150 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
Escherichia coli ECRC100 0.33 OKFHMN_21495 qseF two-component system response regulator QseF/GlrR 0.24 OKFHMN_05585 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
Enterobacter asburiae PDN3 0.33 EX28DRAFT_0096 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 0.27 EX28DRAFT_2045 thiol reductant ABC exporter, CydD subunit low > 76
Escherichia coli ECRC98 0.33 JDDGAC_25160 qseF two-component system response regulator QseF/GlrR 0.24 JDDGAC_09395 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD
Escherichia coli ECRC102 0.33 NIAGMN_19265 qseF two-component system response regulator QseF/GlrR 0.24 NIAGMN_03305 cydD cysteine/glutathione ABC transporter permease/ATP-binding protein CydD

Not shown: 62 genomes with orthologs for Atu3296 only; 5 genomes with orthologs for Atu4089 only