Conservation of cofitness between Atu2333 and Atu1577 in Agrobacterium fabrum C58

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2333 ATP-dependent RNA helicase 1.0 Atu1577 ABC transporter, substrate binding protein (amino acid) 0.29 10
Rhizobium sp. OAE497 0.62 ABIE40_RS13915 DEAD/DEAH box helicase 0.81 ABIE40_RS08815 amino acid ABC transporter substrate-binding protein low > 107
Sinorhizobium meliloti 1021 0.59 SM_b20880 ATP-dependent RNA helicase 0.80 SMc02118 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, periplasmic substrate-binding component (from data) low > 103
Phaeobacter inhibens DSM 17395 0.46 PGA1_c11390 putative ATP-dependent RNA helicase RhlE 0.53 PGA1_c01980 glutamate/glutamine/aspartate/asparagine-binding protein BztA low > 62
Dinoroseobacter shibae DFL-12 0.44 Dshi_2715 DEAD/DEAH box helicase domain protein (RefSeq) 0.54 Dshi_0318 cationic amino acid ABC transporter, periplasmic binding protein (RefSeq) low > 64
Bosea sp. OAE506 0.42 ABIE41_RS22380 DEAD/DEAH box helicase 0.69 ABIE41_RS16030 amino acid ABC transporter substrate-binding protein low > 77
Rhodopseudomonas palustris CGA009 0.39 TX73_019020 DEAD/DEAH box helicase 0.68 TX73_013240 amino acid ABC transporter substrate-binding protein 0.35 77
Azospirillum sp. SherDot2 0.38 MPMX19_02097 ATP-dependent RNA helicase RhlE 0.67 MPMX19_01338 Putative amino-acid ABC transporter-binding protein YhdW low > 112
Dickeya dadantii 3937 0.37 DDA3937_RS08645 ATP-dependent RNA helicase RhlE 0.62 DDA3937_RS01270 amino acid ABC transporter substrate-binding protein low > 74
Dickeya dianthicola 67-19 0.37 HGI48_RS08785 ATP-dependent RNA helicase RhlE 0.62 HGI48_RS01255 amino acid ABC transporter substrate-binding protein low > 71
Brevundimonas sp. GW460-12-10-14-LB2 0.37 A4249_RS00535 DEAD/DEAH box helicase 0.51 A4249_RS05590 amino acid ABC transporter substrate-binding protein — —
Erwinia tracheiphila SCR3 0.37 LU632_RS09215 rhlE ATP-dependent RNA helicase RhlE 0.64 LU632_RS19770 amino acid ABC transporter substrate-binding protein low > 74
Dickeya dianthicola ME23 0.37 DZA65_RS09075 ATP-dependent RNA helicase RhlE 0.62 DZA65_RS01300 amino acid ABC transporter substrate-binding protein low > 75
Pectobacterium carotovorum WPP14 0.37 HER17_RS13325 ATP-dependent RNA helicase RhlE 0.62 HER17_RS20290 amino acid ABC transporter substrate-binding protein low > 75
Rahnella sp. WP5 0.37 EX31_RS23775 ATP-dependent RNA helicase RhlE 0.62 EX31_RS12155 amino acid ABC transporter substrate-binding protein low > 89
Enterobacter sp. TBS_079 0.37 MPMX20_01425 ATP-dependent RNA helicase RhlE 0.63 MPMX20_04177 Putative amino-acid ABC transporter-binding protein YhdW low > 85
Escherichia coli ECOR27 0.37 NOLOHH_22645 rhlE ATP-dependent RNA helicase RhlE 0.63 NOLOHH_09425 yhdW Putative amino-acid ABC transporter-binding protein YhdW low > 57
Escherichia coli ECRC98 0.37 JDDGAC_09925 rhlE ATP-dependent RNA helicase RhlE 0.63 JDDGAC_21260 yhdW Putative amino-acid ABC transporter-binding protein YhdW — —
Escherichia coli ECRC101 0.37 OKFHMN_06290 rhlE ATP-dependent RNA helicase RhlE 0.63 OKFHMN_17635 yhdW Putative amino-acid ABC transporter-binding protein YhdW — —
Escherichia coli ECRC62 0.37 BNILDI_20925 rhlE ATP-dependent RNA helicase RhlE 0.63 BNILDI_02095 yhdW Putative amino-acid ABC transporter-binding protein YhdW — —
Escherichia coli Nissle 1917 0.37 ECOLIN_RS04245 ATP-dependent RNA helicase RhlE 0.63 ECOLIN_RS18775 amino acid ABC transporter substrate-binding protein low > 52
Escherichia fergusonii Becca 0.37 EFB2_03308 ATP-dependent RNA helicase RhlE 0.63 EFB2_00555 Putative amino-acid ABC transporter-binding protein YhdW low > 86
Escherichia coli ECRC101 0.37 MCAODC_25505 rhlE ATP-dependent RNA helicase RhlE 0.63 MCAODC_08155 yhdW Putative amino-acid ABC transporter-binding protein YhdW — —
Escherichia coli ECOR38 0.37 HEPCGN_01750 rhlE ATP-dependent RNA helicase RhlE 0.63 HEPCGN_16455 yhdW Putative amino-acid ABC transporter-binding protein YhdW low > 85
Escherichia coli ECRC99 0.37 KEDOAH_21620 rhlE ATP-dependent RNA helicase RhlE 0.63 KEDOAH_10515 yhdW Putative amino-acid ABC transporter-binding protein YhdW — —
Escherichia coli BL21 0.37 ECD_00764 ATP-dependent RNA helicase 0.62 ECD_03126 putative amino-acid transporter subunit low > 60
Escherichia coli ECRC102 0.37 NIAGMN_04335 rhlE ATP-dependent RNA helicase RhlE 0.63 NIAGMN_15395 yhdW Putative amino-acid ABC transporter-binding protein YhdW — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_02916 ATP-dependent RNA helicase RhlE 0.63 OHPLBJKB_00436 Putative amino-acid ABC transporter-binding protein YhdW low > 73
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2194 Superfamily II DNA and RNA helicases 0.63 EX28DRAFT_3321 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain low > 76
Pantoea sp. MT58 0.36 IAI47_13435 ATP-dependent RNA helicase RhlE 0.63 IAI47_02375 amino acid ABC transporter substrate-binding protein low > 76
Castellaniella sp019104865 MT123 0.34 ABCV34_RS07925 DEAD/DEAH box helicase 0.39 ABCV34_RS13105 transporter substrate-binding domain-containing protein low > 48

Not shown: 22 genomes with orthologs for Atu2333 only; 21 genomes with orthologs for Atu1577 only