Conservation of cofitness between Atu3182 and Atu0978 in Agrobacterium fabrum C58

21 genomes with putative orthologs of both genes

Organism	Ratio1	Gene1	Name1	Description1	Ratio2	Gene2	Name2	Description2	Cofit	Rank
Agrobacterium fabrum C58	1.0	Atu3182		hypothetical protein	1.0	Atu0978		two component response regulator	0.19	16
Pseudomonas sp. DMC3	0.57	GFF3479		Inner membrane protein YqaA	0.44	GFF1578		Transcriptional regulatory protein CusR	low	> 89
Pseudomonas sp. SVBP6	0.55	COO64_RS17390		YqaA family protein	0.44	COO64_RS09985		response regulator transcription factor	—	—
Sinorhizobium meliloti 1021	0.53	SM_b21580		hypothetical protein	0.81	SMc02366		transcriptional regulator	low	> 103
Azospirillum sp. SherDot2	0.52	MPMX19_05987		Inner membrane protein YqaA	0.60	MPMX19_00794		Transcriptional activator protein CopR	low	> 112
Azospirillum brasilense Sp245	0.48	AZOBR_RS06835		membrane protein	0.59	AZOBR_RS10800		XRE family transcriptional regulator	low	> 97
Alteromonas macleodii MIT1002	0.38	MIT1002_02311		Inner membrane protein YqaA	0.46	MIT1002_03097		Transcriptional activator protein CopR	low	> 70
Bosea sp. OAE506	0.31	ABIE41_RS03825		VTT domain-containing protein	0.67	ABIE41_RS21440		response regulator transcription factor	low	> 77
Shewanella oneidensis MR-1	0.30	SO3561		conserved hypothetical protein (NCBI ptt file)	0.46	SO4428		DNA-binding response regulator (NCBI ptt file)	low	> 76
Enterobacter asburiae PDN3	0.29	EX28DRAFT_2775		Predicted membrane protein	0.41	EX28DRAFT_1165		heavy metal response regulator	low	> 76
Dickeya dianthicola ME23	0.29	DZA65_RS17405		DedA family protein	0.42	DZA65_RS03595		copper/silver response regulator transcription factor SilR	low	> 75
Dickeya dianthicola 67-19	0.29	HGI48_RS16310		DedA family protein	0.42	HGI48_RS03485		heavy metal response regulator transcription factor	low	> 71
Klebsiella pneumoniae MKP103	0.28	KDGMDA_02795		SNARE associated Golgi protein	0.40	KDGMDA_00710		copper/silver response regulator transcription factor SilR	low	> 95
Variovorax sp. SCN45	0.27	GFF2143		probable membrane protein YPO3302	0.44	GFF2474		Two-component transcriptional response regulator SMc02366, LuxR family	low	> 127
Shewanella loihica PV-4	0.26	Shew_1225		hypothetical protein (RefSeq)	0.47	Shew_0097		two component transcriptional regulator (RefSeq)	low	> 60
Shewanella sp. ANA-3	0.26	Shewana3_3162		hypothetical protein (RefSeq)	0.46	Shewana3_0282		two component transcriptional regulator (RefSeq)	low	> 73
Shewanella amazonensis SB2B	0.26	Sama_1056		hypothetical protein (RefSeq)	0.44	Sama_3534		response regulator receiver protein (RefSeq)	—	—
Phocaeicola dorei CL03T12C01	0.25	ABI39_RS06045		DedA family protein	0.35	ABI39_RS05370		response regulator transcription factor	low	> 72
Enterobacter sp. TBS_079	0.25	MPMX20_03569		Inner membrane protein YqaA	0.42	MPMX20_02319		Transcriptional regulatory protein CusR	low	> 85
Parabacteroides merdae CL09T00C40	0.23	HMPREF1078_RS06815		VTT domain-containing protein	0.38	HMPREF1078_RS01665		response regulator transcription factor	low	> 61
Bacteroides ovatus ATCC 8483	0.18	BACOVA_01346		SNARE-like domain protein	0.33	BACOVA_02385		response regulator receiver domain protein	low	> 96
Bacteroides thetaiotaomicron VPI-5482	0.18	BT3251		conserved hypothetical protein, putative integral membrane protein (NCBI ptt file)	0.33	BT0682		two-component system response regulator (NCBI ptt file)	low	> 81

Not shown: 57 genomes with orthologs for Atu3182 only; 21 genomes with orthologs for Atu0978 only